RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 KRTAP21-3Q3LHN1 58 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 UNQ9165/PRO28630Q6UXU0 137 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 REC114Q7Z4M0 266 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 NARS2Q96I59 477 aaKnown RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 RARRES2Q99969 163 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 C20orf24Q9BUV8 137 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 NKX6-2Q9C056 277 aaPredicted RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 TREM1Q9NP99 234 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 UFC1Q9Y3C8 167 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 IGHV4OR15-8A0A075B7B6 117 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 A0A087WW49 117 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 A0A1W2PS18 150 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 MRPS12O15235 138 aaKnown RBP11.58□□□□□ -0.56
COL4A5-203ENST00000470339 PAGE4O60829 102 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 NBEAP1P0C6P0 100 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 PYYP10082 97 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 S100A1P23297 94 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 MEF2BQ02080 365 aaPredicted RBP11.58□□□□□ -0.56
COL4A5-203ENST00000470339 LEMD1Q68G75 181 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 KLHL30-AS1Q8NEE0 82 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 OR4F17Q8NGA8 305 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 OR4F4Q96R69 305 aa11.58□□□□□ -0.56
COL4A5-203ENST00000470339 DAZ1Q9NQZ3 744 aaKnown RBP11.58□□□□□ -0.56
COL4A5-203ENST00000470339 IGHV3OR16-8A0A075B7F1 116 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 ZNF320A2RRD8 509 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 FAM74A7A6NL05 159 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 A8MWP6 167 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 KRBOX1C9JBD0 128 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 LINC01619G3V211 115 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 OR10J4P0C629 311 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 IGLC2P0DOY2 106 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 KLF5Q13887 457 aaPredicted RBP11.57□□□□□ -0.56
COL4A5-203ENST00000470339 KHDC1LQ5JSQ8 128 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 C1QL4Q86Z23 238 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 OR8I2Q8N0Y5 310 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 OR1N2Q8NGR9 330 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 RXFP4Q8TDU9 374 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 DPF1Q92782 380 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 SLC35B3Q9H1N7 401 aa11.57□□□□□ -0.56
COL4A5-203ENST00000470339 PDE6DO43924 150 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 HOXD3P31249 432 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-203ENST00000470339 BMI1P35226 326 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 C18orf65Q6ZTR6 163 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 GRAMD2BQ96HH9 432 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 CITED2Q99967 270 aaPredicted RBP11.56□□□□□ -0.56
COL4A5-203ENST00000470339 TMEM231Q9H6L2 316 aa11.56□□□□□ -0.56
COL4A5-203ENST00000470339 IGHV7-4-1A0A0J9YVY3 117 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 C9JQL5 133 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 C11orf94C9JXX5 98 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 TMEM250H0YL14 139 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 ZNF207O43670 478 aaKnown RBP11.55□□□□□ -0.56
COL4A5-203ENST00000470339 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
COL4A5-203ENST00000470339 GALR1P47211 349 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 MEOX2P50222 304 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 CD81P60033 236 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 UBE2G2P60604 165 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 SRSF2Q01130 221 aaKnown RBP11.55□□□□□ -0.56
COL4A5-203ENST00000470339 PDE6HQ13956 83 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 OR11H1Q8NG94 326 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 TCEAL7Q9BRU2 100 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 ELOVL1Q9BW60 279 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 SMPXQ9UHP9 88 aa11.55□□□□□ -0.56
COL4A5-203ENST00000470339 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
COL4A5-203ENST00000470339 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 A0A087X0K7 114 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 F6UZH7 168 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 H3BQ15 152 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 ZNF253O75346 499 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 APOHP02749 345 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-203ENST00000470339 FHL3Q13643 280 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 NDUFA11Q86Y39 141 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 CCDC28AQ8IWP9 274 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.54□□□□□ -0.56
COL4A5-203ENST00000470339 GLMPQ8WWB7 406 aa11.54□□□□□ -0.56
COL4A5-203ENST00000470339 SFTA3P0C7M3 94 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 MYCNOSP40205 109 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 SYNJ2BPP57105 145 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 TM4SF20Q53R12 229 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 C10orf91Q5T1B1 145 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 C8orf86Q6ZUL3 223 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 RAX2Q96IS3 184 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 SEC11CQ9BY50 192 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 SMAD5-AS1Q9Y6J3 95 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 JMJD1CQ15652 2540 aa11.53□□□□□ -0.56
COL4A5-203ENST00000470339 TMEM213A2RRL7 107 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 CCL24O00175 119 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 CHEK1O14757 476 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 ATF4P18848 351 aaPredicted RBP11.52□□□□□ -0.57
COL4A5-203ENST00000470339 ATP5G3P48201 142 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 DEFB136Q30KP8 78 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 RHPN1-AS1Q9BWJ2 59 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
COL4A5-203ENST00000470339 PEMTQ9UBM1 199 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms