RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 BATFQ16520 125 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 FBXL19-AS1Q494R0 122 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 Q56UQ5 140 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 SIGLEC15Q6ZMC9 328 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 GOLT1AQ6ZVE7 132 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 STPG4Q8N801 248 aa10.79□□□□□ -0.68
BRCA1-209ENST00000470026 SMG1Q96Q15 3661 aaKnown RBP10.78□□□□□ -0.68
BRCA1-209ENST00000470026 IGHV1-24A0A0C4DH33 117 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 NDUFA3O95167 84 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 IGLL1P15814 213 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 MUC15Q8N387 334 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 ZNF491Q8N8L2 437 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 NPBQ8NG41 125 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 OR11H6Q8NGC7 330 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 CFHR4Q92496 578 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 ZNF292O60281 2723 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 TIMM23O14925 209 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 SIAH2O43255 324 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 NDUFB8O95169 186 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 NBL1P41271 181 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 TFPI2P48307 235 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 Q71RC1 249 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-209ENST00000470026 PRNTQ86SH4 94 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 BPIFA4PQ86YQ2 179 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 CLEC5AQ9NY25 188 aa10.78□□□□□ -0.68
BRCA1-209ENST00000470026 WI2-2373I1.2A0A1W2PRP0 233 aa10.77□□□□□ -0.69
BRCA1-209ENST00000470026 SH2D7A6NKC9 451 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-209ENST00000470026 LIPFP07098 398 aa10.77□□□□□ -0.69
BRCA1-209ENST00000470026 CD24P25063 80 aa10.77□□□□□ -0.69
BRCA1-209ENST00000470026 ZNF672Q499Z4 452 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-209ENST00000470026 OR4F17Q8NGA8 305 aa10.77□□□□□ -0.69
BRCA1-209ENST00000470026 AKAP13Q12802 2813 aa10.77□□□□□ -0.69
BRCA1-209ENST00000470026 SYS1-DBNDD2H3BUS1 97 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 OR5AL1P0C617 328 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 ZC2HC1AQ96GY0 325 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-209ENST00000470026 M0QZ24 198 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 CHEK1O14757 476 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 NBR2O15453 112 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 PLGLAQ15195 96 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 PRR31Q5SQ13 230 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 RNF125Q96EQ8 232 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 ZNF414Q96IQ9 312 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 C17orf77Q96MU5 243 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 DPM3Q9P2X0 92 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 ACACAQ13085 2346 aa10.76□□□□□ -0.69
BRCA1-209ENST00000470026 A0A1B0GW15 77 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 K7ENP7 123 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 HLA-DRB1P01911 266 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 HTR1DP28221 377 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 PSG3Q16557 428 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 POLEQ07864 2286 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 APC2O95996 2303 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 ANKRD11Q6UB99 2663 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-209ENST00000470026 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.75□□□□□ -0.69
BRCA1-209ENST00000470026 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 ODF3BA8MYP8 253 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 CNIH1O95406 144 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 CRIP1P50238 77 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 LINC01560Q8TB33 94 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 RAB1BQ9H0U4 201 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 ST20Q9HBF5 79 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 LAMA5O15230 3695 aa10.75□□□□□ -0.69
BRCA1-209ENST00000470026 TRAV30A0A087WSZ9 112 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 OR4C46A6NHA9 309 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 LEPROTL1O95214 131 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 PDE6HQ13956 83 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 Q6AWC8 147 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 FANCD2OSQ96PS1 177 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 ONECUT1Q9UBC0 465 aa10.74□□□□□ -0.69
BRCA1-209ENST00000470026 IGLV11-55A0A075B6I3 123 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 NPIPB5A8MRT5 1133 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 K7EQM0 130 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 M0R1W7 72 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 RIGQ13278 110 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 COX8CQ7Z4L0 72 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 ABCA1O95477 2261 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 F8W735 103 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-209ENST00000470026 IL4P05112 153 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 ARMS2P0C7Q2 107 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 PET117Q6UWS5 81 aa10.73□□□□□ -0.69
BRCA1-209ENST00000470026 NEU4Q8WWR8 484 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-209ENST00000470026 CEACAM3P40198 252 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 C5orf64Q2M2E5 130 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 S100A7AQ86SG5 101 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 ARL6IP6Q8N6S5 226 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
BRCA1-209ENST00000470026 SERTM2A0A1B0GWG4 89 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 TOX4O94842 621 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 PRTN3P24158 256 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 PPP1R14DQ9NXH3 145 aa10.72□□□□□ -0.69
BRCA1-209ENST00000470026 GRNP28799 593 aaKnown RBP10.71□□□□□ -0.69
BRCA1-209ENST00000470026 FCGR2BP31994 310 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-209ENST00000470026 FBLN7Q53RD9 439 aa10.71□□□□□ -0.69
BRCA1-209ENST00000470026 TTC9CQ8N5M4 171 aa10.71□□□□□ -0.69
BRCA1-209ENST00000470026 TMEM191AQ9H0A3 160 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms