RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
PCCB-209ENST00000469217 TMA7Q9Y2S6 64 aaKnown RBP13.2□□□□□ -0.3
PCCB-209ENST00000469217 ZNF98A6NK75 572 aa13.19□□□□□ -0.3
PCCB-209ENST00000469217 CHEK1O14757 476 aa13.19□□□□□ -0.3
PCCB-209ENST00000469217 SPATA31B1PQ5VZV4 182 aa13.19□□□□□ -0.3
PCCB-209ENST00000469217 WFDC9Q8NEX5 89 aa13.19□□□□□ -0.3
PCCB-209ENST00000469217 NARS2Q96I59 477 aaKnown RBP13.19□□□□□ -0.3
PCCB-209ENST00000469217 SELENOKQ9Y6D0 94 aa13.19□□□□□ -0.3
PCCB-209ENST00000469217 TRAV5A0A0B4J249 113 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 TMEM218A2RU14 115 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCCB-209ENST00000469217 APOC3P02656 99 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 FAM122CQ6P4D5 195 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 LYPD6BQ8NI32 183 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 SLC25A22Q9H936 323 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 A0A1W2PS18 150 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 UMAD1C9J7I0 102 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 CD33P20138 364 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 FHITP49789 147 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 RHOBP62745 196 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 SRSF3P84103 164 aaKnown RBP13.18□□□□□ -0.3
PCCB-209ENST00000469217 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 S100A7AQ86SG5 101 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 FUT9Q9Y231 359 aa13.18□□□□□ -0.3
PCCB-209ENST00000469217 A0A1W2PPV4 95 aa13.17□□□□□ -0.3
PCCB-209ENST00000469217 RNF2Q99496 336 aa13.17□□□□□ -0.3
PCCB-209ENST00000469217 MRPL32Q9BYC8 188 aaKnown RBP13.17□□□□□ -0.3
PCCB-209ENST00000469217 SIGLEC8Q9NYZ4 499 aa13.17□□□□□ -0.3
PCCB-209ENST00000469217 MLXQ9UH92 298 aa13.17□□□□□ -0.3
PCCB-209ENST00000469217 SEC14L6B5MCN3 397 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 SAP30O75446 220 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 S100A7P31151 101 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 RAB5CP51148 216 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 C16orf54Q6UWD8 224 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 HMGB3O15347 200 aaKnown RBP13.16□□□□□ -0.3
PCCB-209ENST00000469217 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 CDC34P49427 236 aaPredicted RBP13.16□□□□□ -0.3
PCCB-209ENST00000469217 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 C1orf194Q5T5A4 169 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 SSX7Q7RTT5 188 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 OR8I2Q8N0Y5 310 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 GLMPQ8WWB7 406 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 GRAMD2BQ96HH9 432 aa13.16□□□□□ -0.3
PCCB-209ENST00000469217 ATRAIDQ6UW56 229 aa13.15□□□□□ -0.3
PCCB-209ENST00000469217 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
PCCB-209ENST00000469217 SLC25A2Q9BXI2 301 aa13.15□□□□□ -0.3
PCCB-209ENST00000469217 ACTR3CQ9C0K3 210 aaPredicted RBP13.15□□□□□ -0.3
PCCB-209ENST00000469217 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
PCCB-209ENST00000469217 TREM1Q9NP99 234 aa13.15□□□□□ -0.3
PCCB-209ENST00000469217 BMI1P35226 326 aa13.14□□□□□ -0.31
PCCB-209ENST00000469217 C10orf91Q5T1B1 145 aa13.14□□□□□ -0.31
PCCB-209ENST00000469217 FAM213BQ8TBF2 198 aa13.14□□□□□ -0.31
PCCB-209ENST00000469217 DYNLRB2Q8TF09 96 aa13.14□□□□□ -0.31
PCCB-209ENST00000469217 BTN1A1Q13410 526 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.13□□□□□ -0.31
PCCB-209ENST00000469217 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
PCCB-209ENST00000469217 RNF24Q9Y225 148 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
PCCB-209ENST00000469217 CTXND1A0A1B0GTU2 59 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 IGLL1P15814 213 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 FAM90A2PQ658T7 463 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 DPPA3Q6W0C5 159 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 SIGLEC15Q6ZMC9 328 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
PCCB-209ENST00000469217 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
PCCB-209ENST00000469217 CD5P06127 495 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 STAG3L2P0CL84 134 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 STAG3L3P0CL85 134 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 RPL7P18124 248 aaKnown RBP13.12□□□□□ -0.31
PCCB-209ENST00000469217 TAS2R45P59539 299 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 CD300EQ496F6 205 aaPredicted RBP13.12□□□□□ -0.31
PCCB-209ENST00000469217 C9orf66Q5T8R8 295 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 TCF24Q7RTU0 167 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 ZNF503Q96F45 646 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 MCRIP2Q9BUT9 160 aaKnown RBP13.12□□□□□ -0.31
PCCB-209ENST00000469217 SMAD5-AS1Q9Y6J3 95 aa13.12□□□□□ -0.31
PCCB-209ENST00000469217 IGKV3-7A0A075B6H7 116 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 F8W036 122 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 IGLV1-51P01701 117 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
PCCB-209ENST00000469217 PYYP10082 97 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 GP9P14770 177 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 RPL11P62913 178 aaKnown RBP13.11□□□□□ -0.31
PCCB-209ENST00000469217 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 PRR31Q5SQ13 230 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 LCN15Q6UWW0 184 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 SEC11CQ9BY50 192 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 OR7C2O60412 319 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 INSL3P51460 131 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 TMEM61Q8N0U2 210 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 GPR82Q96P67 336 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 NKX6-2Q9C056 277 aaPredicted RBP13.11□□□□□ -0.31
PCCB-209ENST00000469217 OR51M1Q9H341 326 aa13.11□□□□□ -0.31
PCCB-209ENST00000469217 HELTA6NFD8 242 aa13.1□□□□□ -0.31
PCCB-209ENST00000469217 OR10J4P0C629 311 aa13.1□□□□□ -0.31
PCCB-209ENST00000469217 ARL14EPLP0DKL9 152 aa13.1□□□□□ -0.31
PCCB-209ENST00000469217 GALR1P47211 349 aa13.1□□□□□ -0.31
PCCB-209ENST00000469217 FGF8P55075 233 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 616.7 ms