RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 BMPR1BO00238 502 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 DUTP33316 252 aaKnown RBP10.03□□□□□ -0.8
USP11-206ENST00000469080 SEC11AP67812 179 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 MS4A5Q9H3V2 200 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 CTXND1A0A1B0GTU2 59 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 C17orf100A8MU93 164 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 SSX8Q7RTT4 187 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 MRPL20Q9BYC9 149 aaKnown RBP10.03□□□□□ -0.8
USP11-206ENST00000469080 TCF19Q9Y242 345 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
USP11-206ENST00000469080 OPRK1P41145 380 aa10.02□□□□□ -0.8
USP11-206ENST00000469080 TM4SF20Q53R12 229 aa10.02□□□□□ -0.8
USP11-206ENST00000469080 SH2D7A6NKC9 451 aaPredicted RBP10.02□□□□□ -0.81
USP11-206ENST00000469080 H3BRM9 83 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 DLL1O00548 723 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 NDUFS7O75251 213 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 CRYBB3P26998 211 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 COX19Q49B96 90 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 C1orf229Q6ZS94 237 aaPredicted RBP10.02□□□□□ -0.81
USP11-206ENST00000469080 Q8NA96 180 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 NHLRC2Q8NBF2 726 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
USP11-206ENST00000469080 C11orf1Q9H5F2 150 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 UBTD1Q9HAC8 227 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 WFDC2Q14508 124 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 C1orf162Q8NEQ5 155 aaPredicted RBP10.02□□□□□ -0.81
USP11-206ENST00000469080 TMEM191AQ9H0A3 160 aa10.02□□□□□ -0.81
USP11-206ENST00000469080 KMT2EQ8IZD2 1858 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 A0A1W2PPM0 123 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 APCSP02743 223 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 ORM2P19652 201 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 NBL1P41271 181 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 RTL8BQ17RB0 113 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 SPAG8Q99932 426 aaPredicted RBP10.01□□□□□ -0.81
USP11-206ENST00000469080 TMEM147Q9BVK8 224 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 PROP1O75360 226 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 ZNF714Q96N38 554 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 NDFIP1Q9BT67 221 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 FOXE3Q13461 319 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 FXYD3Q14802 87 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 IGFL2Q6UWQ7 119 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 GNB1LQ9BYB4 327 aa10.01□□□□□ -0.81
USP11-206ENST00000469080 IGLV1-44P01699 117 aa10□□□□□ -0.81
USP11-206ENST00000469080 SPXQ9BT56 116 aa10□□□□□ -0.81
USP11-206ENST00000469080 NCBP2LA6PVI3 153 aaKnown RBP10□□□□□ -0.81
USP11-206ENST00000469080 E7EQL1 145 aa10□□□□□ -0.81
USP11-206ENST00000469080 LRRC75BQ2VPJ9 315 aa10□□□□□ -0.81
USP11-206ENST00000469080 SPATA25Q9BR10 227 aa10□□□□□ -0.81
USP11-206ENST00000469080 ZNF355PQ9NSJ1 428 aa10□□□□□ -0.81
USP11-206ENST00000469080 SAMD5Q5TGI4 173 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 MBNL2Q5VZF2 373 aaKnown RBP9.99□□□□□ -0.81
USP11-206ENST00000469080 TMEM116Q8NCL8 245 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 ARPC1AQ92747 370 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 RNASE6Q93091 150 aaKnown RBP9.99□□□□□ -0.81
USP11-206ENST00000469080 IDI2-AS1Q9NZ38 188 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 ERG28Q9UKR5 140 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 M0QXV9 152 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 MT-ND6P03923 174 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 GNG4P50150 75 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 BRWD1-AS2P59051 145 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 CDSNQ15517 529 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 GAFA1Q96PS6 74 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 C8orf86Q6ZUL3 223 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
USP11-206ENST00000469080 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 ZNF331Q9NQX6 463 aaPredicted RBP9.99□□□□□ -0.81
USP11-206ENST00000469080 TNFRSF19Q9NS68 423 aa9.99□□□□□ -0.81
USP11-206ENST00000469080 MOSP00540 346 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 THBDP07204 575 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 SSBP2P81877 361 aaPredicted RBP9.98□□□□□ -0.81
USP11-206ENST00000469080 ZNF562Q6V9R5 426 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 NPCDR1Q9BY65 106 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 JMJD1CQ15652 2540 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 TRBV9A0A0B4J1U6 114 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 KLRD1Q13241 179 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 PSG5Q15238 335 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 LINC00173Q6ZV60 143 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 C18orf32Q8TCD1 76 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 FLYWCH2Q96CP2 140 aaKnown RBP9.98□□□□□ -0.81
USP11-206ENST00000469080 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 IFI27L2Q9H2X8 130 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 MT-ATP8P03928 68 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 INSL3P51460 131 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 TMEM200BQ69YZ2 307 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 ZNF295-AS1Q8N0V1 137 aa9.98□□□□□ -0.81
USP11-206ENST00000469080 SRRM4A7MD48 611 aaKnown RBP9.97□□□□□ -0.81
USP11-206ENST00000469080 C15orf65H3BRN8 121 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 SAA1P0DJI8 122 aaPredicted RBP9.97□□□□□ -0.81
USP11-206ENST00000469080 CNTFRP26992 372 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 RPL8P62917 257 aaKnown RBP9.97□□□□□ -0.81
USP11-206ENST00000469080 OR9G1Q8NH87 305 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 RPEQ96AT9 228 aa9.97□□□□□ -0.81
USP11-206ENST00000469080 INSIG2Q9Y5U4 225 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms