RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 SRD5A1P18405 259 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 CRYBB3P26998 211 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 DERL1Q9BUN8 251 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 FOXE3Q13461 319 aa14.64□□□□□ -0.07
SMC4-209ENST00000468653 TMEM88Q6PEY1 159 aa14.64□□□□□ -0.07
SMC4-209ENST00000468653 ELOVL1Q9BW60 279 aa14.64□□□□□ -0.07
SMC4-209ENST00000468653 ESM1Q9NQ30 184 aa14.64□□□□□ -0.07
SMC4-209ENST00000468653 ZNF586Q9NXT0 402 aa14.64□□□□□ -0.07
SMC4-209ENST00000468653 DNASE2O00115 360 aaPredicted RBP14.63□□□□□ -0.07
SMC4-209ENST00000468653 ELANEP08246 267 aa14.63□□□□□ -0.07
SMC4-209ENST00000468653 PGPA6NDG6 321 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 RPL7P18124 248 aaKnown RBP14.62□□□□□ -0.07
SMC4-209ENST00000468653 ADIRFQ15847 76 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 FAM209BQ5JX69 171 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 CBLN2Q8IUK8 224 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 OR8I2Q8N0Y5 310 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 OR5B12Q96R08 314 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 METTL26Q96S19 204 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 SERTAD4Q9NUC0 356 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 CDC42EP3Q9UKI2 254 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 RPLP1P05386 114 aaKnown RBP14.62□□□□□ -0.07
SMC4-209ENST00000468653 IGLC2P0DOY2 106 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 RPL15P61313 204 aaKnown RBP14.62□□□□□ -0.07
SMC4-209ENST00000468653 ZNF418Q8TF45 676 aaPredicted RBP14.62□□□□□ -0.07
SMC4-209ENST00000468653 Q9H3A6 140 aa14.62□□□□□ -0.07
SMC4-209ENST00000468653 PEF1Q9UBV8 284 aaKnown RBP14.62□□□□□ -0.07
SMC4-209ENST00000468653 CLPSL1A2RUU4 121 aa14.61□□□□□ -0.07
SMC4-209ENST00000468653 B4DEV8 164 aa14.61□□□□□ -0.07
SMC4-209ENST00000468653 CLDN34H7C241 214 aa14.61□□□□□ -0.07
SMC4-209ENST00000468653 NDUFA4O00483 81 aa14.61□□□□□ -0.07
SMC4-209ENST00000468653 MRPS12O15235 138 aaKnown RBP14.61□□□□□ -0.07
SMC4-209ENST00000468653 GGCTO75223 188 aaKnown RBP14.61□□□□□ -0.07
SMC4-209ENST00000468653 SLC25A5P05141 298 aaKnown RBP14.61□□□□□ -0.07
SMC4-209ENST00000468653 MYCNOSP40205 109 aa14.61□□□□□ -0.07
SMC4-209ENST00000468653 TRBV19A0A075B6N1 114 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 HELTA6NFD8 242 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 ZNF207O43670 478 aaKnown RBP14.6□□□□□ -0.07
SMC4-209ENST00000468653 CRYBA1P05813 215 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 RPL35P42766 123 aaKnown RBP14.6□□□□□ -0.07
SMC4-209ENST00000468653 RPL23P62829 140 aaKnown RBP14.6□□□□□ -0.07
SMC4-209ENST00000468653 TCEAL7Q9BRU2 100 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 SMCO4Q9NRQ5 59 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 CD99P14209 185 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 Q6ZSV7 163 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 C2CD4CQ8TF44 421 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 OTORQ9NRC9 128 aa14.6□□□□□ -0.07
SMC4-209ENST00000468653 HIVEP2P31629 2446 aa14.59□□□□□ -0.07
SMC4-209ENST00000468653 PEX7O00628 323 aa14.59□□□□□ -0.07
SMC4-209ENST00000468653 BUB3O43684 328 aa14.59□□□□□ -0.07
SMC4-209ENST00000468653 C17orf77Q96MU5 243 aa14.59□□□□□ -0.07
SMC4-209ENST00000468653 EPDR1Q9UM22 224 aa14.59□□□□□ -0.07
SMC4-209ENST00000468653 C5orf17Q8NAS9 161 aa14.58□□□□□ -0.08
SMC4-209ENST00000468653 HIST1H2BAQ96A08 127 aa14.58□□□□□ -0.08
SMC4-209ENST00000468653 TRBV20OR9-2A0A075B6H5 130 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 A0A087WWC5 75 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 IGHV3-66A0A0C4DH42 116 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 ZNF320A2RRD8 509 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 RNASE1P07998 156 aaKnown RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 ATF4P18848 351 aaPredicted RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 CNN1P51911 297 aaKnown RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 GNG5P63218 68 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 C1orf194Q5T5A4 169 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 UNQ9165/PRO28630Q6UXU0 137 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 KLHDC1Q8N7A1 406 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 RNF152Q8N8N0 203 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 CMTM2Q8TAZ6 248 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 GPR82Q96P67 336 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 RPH3ALQ9UNE2 315 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 IGHV3OR16-13A0A075B7E8 117 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 IGHV3-49A0A0A0MS15 119 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 IGHV3-74A0A0B4J1X5 117 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 APOHP02749 345 aaPredicted RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 PDE6HQ13956 83 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 Q71RC1 249 aaPredicted RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 LINC01551Q86U37 167 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 LYPD1Q8N2G4 141 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 EXOC3-AS1Q8N2X6 119 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 MYOZ3Q8TDC0 251 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 UBE2E2Q96LR5 201 aa14.57□□□□□ -0.08
SMC4-209ENST00000468653 AURKAIP1Q9NWT8 199 aaPredicted RBP14.57□□□□□ -0.08
SMC4-209ENST00000468653 PGPEP1LA6NFU8 196 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 C9JCJ5 164 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 FOSL1P15407 271 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 GNG4P50150 75 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 U3KQE9 123 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 OTOGQ6ZRI0 2925 aa14.56□□□□□ -0.08
SMC4-209ENST00000468653 ZNF785A8K8V0 405 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 SLC17A3O00476 420 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 MT-ND4LP03901 98 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 LGALS1P09382 135 aaKnown RBP14.55□□□□□ -0.08
SMC4-209ENST00000468653 GALR1P47211 349 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 HILS1P60008 231 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 FAM106AQ4KMX7 169 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 CENPWQ5EE01 88 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 SIGLEC15Q6ZMC9 328 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 TMEM190Q8WZ59 177 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 ATG101Q9BSB4 218 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 PRELID1Q9Y255 219 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 SMAD5-AS1Q9Y6J3 95 aa14.55□□□□□ -0.08
SMC4-209ENST00000468653 RNF212Q495C1 297 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms