RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 ISLRO14498 428 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 PTTG1O95997 202 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 RPL7P18124 248 aaKnown RBP12.7□□□□□ -0.38
CLDN11-202ENST00000468358 H2BFSP57053 126 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 PLP1P60201 277 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 PXDC1Q5TGL8 231 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 OR11H2Q8NH07 326 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 SLC25A31Q9H0C2 315 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 OR5AC2Q9NZP5 309 aa12.7□□□□□ -0.38
CLDN11-202ENST00000468358 IGKV3-20P01619 116 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 DEFB1P60022 68 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 NUTF2P61970 127 aaKnown RBP12.69□□□□□ -0.38
CLDN11-202ENST00000468358 ATP6V1FQ16864 119 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 Q6ZRG5 221 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 PPP1R1CQ8WVI7 109 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 RNF24Q9Y225 148 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 WDR83OSQ9Y284 106 aa12.69□□□□□ -0.38
CLDN11-202ENST00000468358 SOCS3O14543 225 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 PET100P0DJ07 73 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 C4BPBP20851 252 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 FGF7P21781 194 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 EWSR1Q01844 656 aaKnown RBP eCLIP12.68□□□□□ -0.38
CLDN11-202ENST00000468358 NHLH2Q02577 135 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 TMEM41BQ5BJD5 291 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 LINC00305Q7Z4B0 112 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 ALG5Q9Y673 324 aa12.68□□□□□ -0.38
CLDN11-202ENST00000468358 H0YIZ8 118 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 H3BMM0 161 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 VWC2Q2TAL6 325 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 GDF5OSQ5U4N7 250 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 C10orf113Q5VZT2 155 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 OR5C1Q8NGR4 320 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 CLEC5AQ9NY25 188 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
CLDN11-202ENST00000468358 DNAH7Q8WXX0 4024 aa12.66□□□□□ -0.38
CLDN11-202ENST00000468358 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-202ENST00000468358 PMS2P11Q13670 270 aa12.66□□□□□ -0.38
CLDN11-202ENST00000468358 CLINT1Q14677 625 aa12.66□□□□□ -0.38
CLDN11-202ENST00000468358 OR1L4Q8NGR5 311 aa12.66□□□□□ -0.38
CLDN11-202ENST00000468358 C1QTNF4Q9BXJ3 329 aa12.66□□□□□ -0.38
CLDN11-202ENST00000468358 SAV1Q9H4B6 383 aaPredicted RBP12.66□□□□□ -0.38
CLDN11-202ENST00000468358 F6UB75 175 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 MPC2O95563 127 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 B2MP61769 119 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 IGFL4Q6B9Z1 124 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 THAP6Q8TBB0 222 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 PFDN5Q99471 154 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 XCL2Q9UBD3 114 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 PXMP4Q9Y6I8 212 aa12.65□□□□□ -0.38
CLDN11-202ENST00000468358 CXorf65A6NEN9 183 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 GIG44P09565 113 aaPredicted RBP12.64□□□□□ -0.39
CLDN11-202ENST00000468358 RPL29P47914 159 aaKnown RBP12.64□□□□□ -0.39
CLDN11-202ENST00000468358 FXYD7P58549 80 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 OPCMLQ14982 345 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 BPIFA4PQ86YQ2 179 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 RNF182Q8N6D2 247 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 C20orf173Q96LM9 149 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 C17orf77Q96MU5 243 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 MED28Q9H204 178 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 DNAJC4Q9NNZ3 241 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 SLC39A9Q9NUM3 307 aa12.64□□□□□ -0.39
CLDN11-202ENST00000468358 DEFB4AO15263 64 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 MPDU1O75352 247 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
CLDN11-202ENST00000468358 PRR20EP86478 221 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 PRR20CP86479 221 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 PRR20DP86480 221 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 PRR20BP86481 221 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 PRR20AP86496 221 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 FAM78BQ5VT40 261 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 SPATA31B1PQ5VZV4 182 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 MBD2Q9UBB5 411 aa12.63□□□□□ -0.39
CLDN11-202ENST00000468358 A0A0J9YX75 114 aa12.62□□□□□ -0.39
CLDN11-202ENST00000468358 MORN5Q5VZ52 161 aa12.62□□□□□ -0.39
CLDN11-202ENST00000468358 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
CLDN11-202ENST00000468358 RNF126Q9BV68 326 aa12.62□□□□□ -0.39
CLDN11-202ENST00000468358 NPCDR1Q9BY65 106 aa12.62□□□□□ -0.39
CLDN11-202ENST00000468358 A0A087X0K7 114 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 TRAV8-2A0A0B4J237 113 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 CXCL3P19876 107 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 RPL12P30050 165 aaKnown RBP12.61□□□□□ -0.39
CLDN11-202ENST00000468358 LCN15Q6UWW0 184 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 SMIM3Q9BZL3 60 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 HSPB11Q9Y547 144 aa12.61□□□□□ -0.39
CLDN11-202ENST00000468358 IGHV3OR16-12A0A075B7B8 117 aa12.6□□□□□ -0.39
CLDN11-202ENST00000468358 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
CLDN11-202ENST00000468358 H3BTX0 84 aa12.6□□□□□ -0.39
CLDN11-202ENST00000468358 HLA-DMBP28068 263 aa12.6□□□□□ -0.39
CLDN11-202ENST00000468358 PSG9Q00887 426 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms