RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FBXL17Q9UF56 701 aa8.15□□□□□ -1.1
COL4A6-205ENST00000468338 TENM2Q9NT68 2774 aa8.15□□□□□ -1.11
COL4A6-205ENST00000468338 C5orf51A6NDU8 294 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 ZNF98A6NK75 572 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 SELENOTP62341 195 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 ZFAND6Q6FIF0 208 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 CYP2G1PQ6ZSU1 146 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 STHQ8IWL8 128 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 ENKURQ8TC29 256 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 MARVELD1Q9BSK0 173 aa8.14□□□□□ -1.11
COL4A6-205ENST00000468338 KNCNA6PVL3 124 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 FAM25EA8MYX2 175 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 PRAF2O60831 178 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 SPP1P10451 314 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 SNRPD3P62318 126 aaKnown RBP8.13□□□□□ -1.11
COL4A6-205ENST00000468338 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 PSMG4Q5JS54 123 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 MORN3Q6PF18 240 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-205ENST00000468338 GSG1LQ6UXU4 331 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 OR8I2Q8N0Y5 310 aa8.13□□□□□ -1.11
COL4A6-205ENST00000468338 LSM5Q9Y4Y9 91 aaKnown RBP8.13□□□□□ -1.11
COL4A6-205ENST00000468338 A0A0J9YWU9 116 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 INMT-MINDY4F8WBC2 141 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 H3BMM0 161 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 H3BRN7 92 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 CA1P00915 261 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-205ENST00000468338 ORM2P19652 201 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 PSMB3P49720 205 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 LINC00310P59036 64 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 RRAS2P62070 204 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-205ENST00000468338 EWSR1Q01844 656 aaKnown RBP eCLIP8.12□□□□□ -1.11
COL4A6-205ENST00000468338 VWC2Q2TAL6 325 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 SAMD13Q5VXD3 122 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 CSNK1G2-AS1Q8NCQ2 148 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 RARRES2Q99969 163 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 SHANK2-AS3Q9BTD1 123 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 TMEM147Q9BVK8 224 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 GPN1Q9HCN4 374 aaPredicted RBP8.12□□□□□ -1.11
COL4A6-205ENST00000468338 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
COL4A6-205ENST00000468338 PLECQ15149 4684 aaKnown RBP8.11□□□□□ -1.11
COL4A6-205ENST00000468338 FAM24AA6NFZ4 105 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 L7N2F9 121 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 ISLRO14498 428 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 HYPMO75409 117 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 LINC00869P0C866 280 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 HLA-DRB4P13762 266 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 C4BPBP20851 252 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 S100A7P31151 101 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 MEOX2P50222 304 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 VAMP2P63027 116 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 PXDC1Q5TGL8 231 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 PATE2Q6UY27 113 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 TMEM252Q8N6L7 170 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 OR1B1Q8NGR6 318 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 OR11H2Q8NH07 326 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 PPP1R14BQ96C90 147 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 GPR82Q96P67 336 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 SLC25A39Q9BZJ4 359 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-205ENST00000468338 LYRM2Q9NU23 88 aaPredicted RBP8.11□□□□□ -1.11
COL4A6-205ENST00000468338 HLA-DRB4X5D2U9 266 aa8.11□□□□□ -1.11
COL4A6-205ENST00000468338 IGSF23A1L1A6 192 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 ZNF705EA8MWA4 302 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-205ENST00000468338 AGPAT2O15120 278 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 CST7O76096 145 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 PVALBP20472 110 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-205ENST00000468338 ID1P41134 155 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 GALR1P47211 349 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 SULT1A1P50225 295 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 CAV2P51636 162 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 DEFA1P59665 94 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 DEFA3P59666 94 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 SLC38A11Q08AI6 406 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 ZNF546Q86UE3 836 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 LYSTQ99698 3801 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 MGST2Q99735 147 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 RSG1Q9BU20 258 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 SCRT1Q9BWW7 348 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 NMES1Q9C002 83 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 C11orf68Q9H3H3 251 aaKnown RBP8.1□□□□□ -1.11
COL4A6-205ENST00000468338 SAV1Q9H4B6 383 aaPredicted RBP8.1□□□□□ -1.11
COL4A6-205ENST00000468338 HIGD1AQ9Y241 93 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 WDR83OSQ9Y284 106 aa8.1□□□□□ -1.11
COL4A6-205ENST00000468338 RYR2Q92736 4967 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 LCE6AA0A183 80 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 A8MTW9 85 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 MRPS12O15235 138 aaKnown RBP8.09□□□□□ -1.11
COL4A6-205ENST00000468338 RPL7P18124 248 aaKnown RBP8.09□□□□□ -1.11
COL4A6-205ENST00000468338 NHLH2Q02577 135 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 GDF5OSQ5U4N7 250 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 SPATA31B1PQ5VZV4 182 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 FOXI2Q6ZQN5 318 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 TMEM217Q8N7C4 229 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 Q8NAQ8 132 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 SLC25A22Q9H936 323 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 DOK5Q9P104 306 aa8.09□□□□□ -1.11
COL4A6-205ENST00000468338 DNAH1Q9P2D7 4330 aa8.08□□□□□ -1.12
COL4A6-205ENST00000468338 A0A087X0K7 114 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms