RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SAMD13Q5VXD3 122 aa17.39■□□□□ 0.37
PTCH1-210ENST00000468211 RNF182Q8N6D2 247 aa17.39■□□□□ 0.37
PTCH1-210ENST00000468211 TMEM147Q9BVK8 224 aa17.39■□□□□ 0.37
PTCH1-210ENST00000468211 RBM38Q9H0Z9 239 aaKnown RBP17.39■□□□□ 0.37
PTCH1-210ENST00000468211 NACAE9PAV3 2078 aa17.39■□□□□ 0.37
PTCH1-210ENST00000468211 PMS2P5A8MQ11 134 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 CCNKO75909 580 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 PRM2P04554 102 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 UBE2MP61081 183 aaKnown RBP17.38■□□□□ 0.37
PTCH1-210ENST00000468211 BAK1Q16611 211 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 LINC00336Q6ZUF6 198 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 TMEM144Q7Z5S9 345 aa17.38■□□□□ 0.37
PTCH1-210ENST00000468211 H3BRN7 92 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 RTL8CO15255 209 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 HTN3P15516 51 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 CNN1P51911 297 aaKnown RBP17.37■□□□□ 0.37
PTCH1-210ENST00000468211 RRN3P1Q2M238 152 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 CYP2G1PQ6ZSU1 146 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 IGF2BP2-AS1Q96M15 143 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 SLC25A39Q9BZJ4 359 aaPredicted RBP17.37■□□□□ 0.37
PTCH1-210ENST00000468211 PSENENQ9NZ42 101 aa17.37■□□□□ 0.37
PTCH1-210ENST00000468211 SMCO3A2RU48 225 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 CRXO43186 299 aaPredicted RBP17.36■□□□□ 0.37
PTCH1-210ENST00000468211 NDUFB6O95139 128 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 OR11H7Q8NGC8 314 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 GPR82Q96P67 336 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 SHANK2-AS3Q9BTD1 123 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 PCLOQ9Y6V0 5065 aa17.36■□□□□ 0.37
PTCH1-210ENST00000468211 PKD1P98161 4303 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 TEX48A0A1B0GUV7 120 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 M0R2Z0 102 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 SSSCA1O60232 199 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 IL5P05113 134 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 FGL1Q08830 312 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 OXA1LQ15070 435 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 SPINK13Q1W4C9 94 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 FAM210BQ96KR6 192 aa17.35■□□□□ 0.37
PTCH1-210ENST00000468211 PRB4P10163 310 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-210ENST00000468211 SPANXN2Q5MJ10 180 aa17.34■□□□□ 0.37
PTCH1-210ENST00000468211 UHRF2Q96PU4 802 aa17.34■□□□□ 0.37
PTCH1-210ENST00000468211 SDHCQ99643 169 aaPredicted RBP17.34■□□□□ 0.37
PTCH1-210ENST00000468211 IGLV2-18A0A075B6J9 118 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 LINC00854A0A1B0GVQ3 168 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 ZNF705GA8MUZ8 300 aaPredicted RBP17.33■□□□□ 0.36
PTCH1-210ENST00000468211 OR4E1P0C645 316 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 RRAS2P62070 204 aaPredicted RBP17.33■□□□□ 0.36
PTCH1-210ENST00000468211 SMIM8Q96KF7 97 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 TMEM208Q9BTX3 173 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 HIGD1AQ9Y241 93 aa17.33■□□□□ 0.36
PTCH1-210ENST00000468211 PRSS29PA6NIE9 313 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 METTL15P1P0C7V9 234 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 LINC00869P0C866 280 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 ANXA7P20073 488 aaKnown RBP17.32■□□□□ 0.36
PTCH1-210ENST00000468211 BTCP35070 178 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 PLP1P60201 277 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 LGALS9BQ3B8N2 356 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 TMEM88Q6PEY1 159 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 BAP18Q8IXM2 172 aa17.32■□□□□ 0.36
PTCH1-210ENST00000468211 NAP1L6A6NFF2 107 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 HYPMO75409 117 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 DUSP14O95147 198 aaKnown RBP17.31■□□□□ 0.36
PTCH1-210ENST00000468211 IFNA21P01568 189 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 OR5G3P0C626 314 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 RAP2BP61225 183 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 DAD1P61803 113 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 TMEM14EPQ6UXP3 125 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 UBE2DNLQ8IWF7 75 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 ZNF738Q8NE65 137 aa17.31■□□□□ 0.36
PTCH1-210ENST00000468211 INSP01308 110 aa17.3■□□□□ 0.36
PTCH1-210ENST00000468211 INPP1P49441 399 aa17.3■□□□□ 0.36
PTCH1-210ENST00000468211 TRIQKQ629K1 86 aa17.3■□□□□ 0.36
PTCH1-210ENST00000468211 PATE2Q6UY27 113 aa17.3■□□□□ 0.36
PTCH1-210ENST00000468211 Q6ZR54 194 aa17.3■□□□□ 0.36
PTCH1-210ENST00000468211 DYNC1H1Q14204 4646 aaKnown RBP17.29■□□□□ 0.36
PTCH1-210ENST00000468211 TRAV12-2A0A075B6T6 113 aa17.29■□□□□ 0.36
PTCH1-210ENST00000468211 RPL7P18124 248 aaKnown RBP17.29■□□□□ 0.36
PTCH1-210ENST00000468211 AZU1P20160 251 aa17.29■□□□□ 0.36
PTCH1-210ENST00000468211 S100A7P31151 101 aa17.29■□□□□ 0.36
PTCH1-210ENST00000468211 DLK1P80370 383 aa17.29■□□□□ 0.36
PTCH1-210ENST00000468211 PLAC8L1A1L4L8 177 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 SCGB1D2O95969 90 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 CXCL3P19876 107 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 SELENOTP62341 195 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 SLC38A11Q08AI6 406 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 ARL16Q0P5N6 197 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 C4orf46Q504U0 113 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 ARL6Q9H0F7 186 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 NPVFQ9HCQ7 196 aa17.28■□□□□ 0.36
PTCH1-210ENST00000468211 RCL1Q9Y2P8 373 aaKnown RBP17.28■□□□□ 0.36
PTCH1-210ENST00000468211 A0A087X0K7 114 aa17.27■□□□□ 0.36
PTCH1-210ENST00000468211 MRPS12O15235 138 aaKnown RBP17.27■□□□□ 0.36
PTCH1-210ENST00000468211 HIST1H1AQ02539 215 aaPredicted RBP17.27■□□□□ 0.36
PTCH1-210ENST00000468211 IAH1Q2TAA2 248 aaPredicted RBP17.27■□□□□ 0.36
PTCH1-210ENST00000468211 OR8A1Q8NGG7 326 aa17.27■□□□□ 0.36
PTCH1-210ENST00000468211 DNAH11Q96DT5 4516 aa17.26■□□□□ 0.35
PTCH1-210ENST00000468211 BOLA2-SMG1P6H3BVE0 249 aa17.26■□□□□ 0.35
PTCH1-210ENST00000468211 K7EPK0 472 aa17.26■□□□□ 0.35
PTCH1-210ENST00000468211 ZNF701M0R085 212 aaPredicted RBP17.26■□□□□ 0.35
PTCH1-210ENST00000468211 FCN2Q15485 313 aa17.26■□□□□ 0.35
PTCH1-210ENST00000468211 PSG3Q16557 428 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms