RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 TMEM147Q9BVK8 224 aa12.21□□□□□ -0.45
TRIM56-203ENST00000467847 SLIRPQ9GZT3 109 aaKnown RBP12.21□□□□□ -0.45
TRIM56-203ENST00000467847 TMED3Q9Y3Q3 217 aa12.21□□□□□ -0.45
TRIM56-203ENST00000467847 M0R2Z0 102 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 SYNGR2O43760 224 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 DUSP14O95147 198 aaKnown RBP12.2□□□□□ -0.46
TRIM56-203ENST00000467847 INSP01308 110 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 S100A7P31151 101 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 CNN1P51911 297 aaKnown RBP12.2□□□□□ -0.46
TRIM56-203ENST00000467847 AP3S2P59780 193 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 AKR1C1Q04828 323 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 SPINK13Q1W4C9 94 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 TMEM182Q6ZP80 229 aaPredicted RBP12.2□□□□□ -0.46
TRIM56-203ENST00000467847 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
TRIM56-203ENST00000467847 ZNF705GA8MUZ8 300 aaPredicted RBP12.19□□□□□ -0.46
TRIM56-203ENST00000467847 NOL3O60936 208 aaKnown RBP12.19□□□□□ -0.46
TRIM56-203ENST00000467847 SPANXN5Q5MJ07 72 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 IGFL4Q6B9Z1 124 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 TOMM5Q8N4H5 51 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 RNF182Q8N6D2 247 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 OR11H7Q8NGC8 314 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 MCFD2Q8NI22 146 aa12.19□□□□□ -0.46
TRIM56-203ENST00000467847 LYRM9A8MSI8 78 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 H3BP45 60 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 SFT2D2O95562 160 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 PRM2P04554 102 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 HOXB5P09067 269 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 FAM3BP58499 235 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-203ENST00000467847 FGL1Q08830 312 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 PYDC2Q56P42 97 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 ACOT7LQ6ZUV0 252 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 SLC25A21Q9BQT8 299 aaPredicted RBP12.18□□□□□ -0.46
TRIM56-203ENST00000467847 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
TRIM56-203ENST00000467847 TRAV8-2A0A0B4J237 113 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 H3BMQ9 156 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 CRXO43186 299 aaPredicted RBP12.17□□□□□ -0.46
TRIM56-203ENST00000467847 DEFB130BP0DP73 79 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 DEFB130AP0DP74 79 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 B2MP61769 119 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 PPP1R1AQ13522 171 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 BAP18Q8IXM2 172 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 ZNF738Q8NE65 137 aa12.17□□□□□ -0.46
TRIM56-203ENST00000467847 STRAPQ9Y3F4 350 aaKnown RBP12.17□□□□□ -0.46
TRIM56-203ENST00000467847 SMCO3A2RU48 225 aa12.16□□□□□ -0.46
TRIM56-203ENST00000467847 H3BRN7 92 aa12.16□□□□□ -0.46
TRIM56-203ENST00000467847 SLC25A39Q9BZJ4 359 aaPredicted RBP12.16□□□□□ -0.46
TRIM56-203ENST00000467847 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 BOLA2-SMG1P6H3BVE0 249 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 IL5P05113 134 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 TSPOP30536 169 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 RAP2BP61225 183 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 CYP2G1PQ6ZSU1 146 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 TMEM144Q7Z5S9 345 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 SHANK2-AS3Q9BTD1 123 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 HIGD1AQ9Y241 93 aa12.15□□□□□ -0.46
TRIM56-203ENST00000467847 F5H768 121 aa12.14□□□□□ -0.47
TRIM56-203ENST00000467847 RPL7P18124 248 aaKnown RBP12.14□□□□□ -0.47
TRIM56-203ENST00000467847 AZU1P20160 251 aa12.14□□□□□ -0.47
TRIM56-203ENST00000467847 HIST1H1AQ02539 215 aaPredicted RBP12.14□□□□□ -0.47
TRIM56-203ENST00000467847 V9GYH0 126 aa12.14□□□□□ -0.47
TRIM56-203ENST00000467847 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 HYPMO75409 117 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 NUDT3O95989 172 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 RHOBP62745 196 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 FCN2Q15485 313 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 DEDD2Q8WXF8 326 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 LINC01587Q99440 93 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 PPP1R14DQ9NXH3 145 aa12.13□□□□□ -0.47
TRIM56-203ENST00000467847 OR5G3P0C626 314 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 LINC00869P0C866 280 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 POLR2GP62487 172 aaKnown RBP eCLIP12.12□□□□□ -0.47
TRIM56-203ENST00000467847 TMEM256Q8N2U0 113 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 OR8A1Q8NGG7 326 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 PSENENQ9NZ42 101 aa12.12□□□□□ -0.47
TRIM56-203ENST00000467847 NBDYA0A0U1RRE5 68 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 ADAP1O75689 374 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 ATP5G1P05496 136 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 HTN1P15515 57 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 CXCL3P19876 107 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 ATP5G3P48201 142 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 TAS2R60P59551 318 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 SELENOTP62341 195 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 ID3Q02535 119 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 TNP2Q05952 138 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 S100A7AQ86SG5 101 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 ZNRF2Q8NHG8 242 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 LRRC20Q8TCA0 184 aa12.11□□□□□ -0.47
TRIM56-203ENST00000467847 A0A087X0K7 114 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 CBY3A6NI87 242 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 SSSCA1O60232 199 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 PLP1P60201 277 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 UBE2MP61081 183 aaKnown RBP12.1□□□□□ -0.47
TRIM56-203ENST00000467847 RRAS2P62070 204 aaPredicted RBP12.1□□□□□ -0.47
TRIM56-203ENST00000467847 PSG3Q16557 428 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 C16orf74Q96GX8 76 aa12.1□□□□□ -0.47
TRIM56-203ENST00000467847 C16orf90A8MZG2 172 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms