RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 OR1L1Q8NH94 360 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 TNFAIP8L1Q8WVP5 186 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 APH1BQ8WW43 257 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 GHSRQ92847 366 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 PTX4Q96A99 478 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 NARS2Q96I59 477 aaKnown RBP1.69□□□□□ -2.14
XRN1-206ENST00000467077 CAMK2N2Q96S95 79 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 S100A13Q99584 98 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 C6orf62Q9GZU0 229 aaPredicted RBP1.69□□□□□ -2.14
XRN1-206ENST00000467077 C11orf68Q9H3H3 251 aaKnown RBP1.69□□□□□ -2.14
XRN1-206ENST00000467077 TAF9BQ9HBM6 251 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 CLN6Q9NWW5 311 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 TVP23BQ9NYZ1 205 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 ZNF230Q9UIE0 474 aaPredicted RBP1.69□□□□□ -2.14
XRN1-206ENST00000467077 GNG8Q9UK08 70 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 WASHC3Q9Y3C0 194 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 SAMHD1Q9Y3Z3 626 aaKnown RBP1.69□□□□□ -2.14
XRN1-206ENST00000467077 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
XRN1-206ENST00000467077 DEFB131BA0A096LNP1 70 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 TRAV25A0A0B4J276 109 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 SERTM2A0A1B0GWG4 89 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 A0A1W2PQL4 384 aaPredicted RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 TMEM213A2RRL7 107 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 METTL15A6NJ78 407 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 H0YJW9 148 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 H7C1H1 209 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 WRBO00258 174 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GABRPO00591 440 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GNGT2O14610 69 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 SOCS1O15524 211 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 YPEL1O60688 119 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GGCTO75223 188 aaKnown RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 SULT1C4O75897 302 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 S1PR2O95136 353 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 HLA-DQA1P01909 254 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 MAS1P04201 325 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 IGKV1-16P04430 117 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 ISG15P05161 165 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GALP22466 123 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 RBM11P57052 281 aaKnown RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 ZNF266Q14584 549 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 TNXAQ16473 311 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 MPV17LQ2QL34 196 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 Q5VSD8 79 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 TMEM244Q5VVB8 128 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 NXNL2Q5VZ03 156 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 OR2T5Q6IEZ7 315 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 CLEC19AQ6UXS0 136 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 UNQ9165/PRO28630Q6UXU0 137 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 SPATA12Q7Z6I5 190 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GPHB5Q86YW7 130 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 CBR4Q8N4T8 237 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 DRAXINQ8NBI3 349 aaPredicted RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 PXT1Q8NFP0 134 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 OR11H7Q8NGC8 314 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 OR2T29Q8NH02 315 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 ACOT12Q8WYK0 555 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 GALMQ96C23 342 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 CMTM5Q96DZ9 223 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 CPNE2Q96FN4 548 aaPredicted RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 ABHD14BQ96IU4 210 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 YPEL2Q96QA6 119 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 TSNAXQ99598 290 aaKnown RBP1.68□□□□□ -2.14
XRN1-206ENST00000467077 RNF5Q99942 180 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 METTL9Q9H1A3 318 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 FGFR1OP2Q9NVK5 253 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 ABRACLQ9P1F3 81 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 JPT1Q9UK76 154 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 S4R3C0 116 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 VPS13DQ5THJ4 4388 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 DNAH2Q9P225 4427 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 HSPG2P98160 4391 aa1.68□□□□□ -2.14
XRN1-206ENST00000467077 FAT2Q9NYQ8 4349 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 IGKV3-7A0A075B6H7 116 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 A0A0J9YXV3 536 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 C7orf66A4D0T2 115 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 OR4C46A6NHA9 309 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 A8MWP6 167 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 M0R129 80 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 DNASE2O00115 360 aaPredicted RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 BPY2O14599 106 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 CCDC22O60826 627 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 CCNKO75909 580 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 FAM107AO95990 144 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 APOA2P02652 100 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 HTR1AP08908 422 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 GTF2F2P13984 249 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 OPRK1P41145 380 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 CMC4P56277 68 aaPredicted RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 UBE2MP61081 183 aaKnown RBP1.67□□□□□ -2.14
XRN1-206ENST00000467077 IL18Q14116 193 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 GLT8D1Q68CQ7 371 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 LAMTOR1Q6IAA8 161 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 ZNF880Q6PDB4 577 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 ASCL4Q6XD76 172 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 PDPNQ86YL7 162 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 GID4Q8IVV7 300 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 HS3ST5Q8IZT8 346 aa1.67□□□□□ -2.14
XRN1-206ENST00000467077 JAGN1Q8N5M9 183 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms