RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 UBE2DNLQ8IWF7 75 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 TMEM208Q9BTX3 173 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 SMCO3A2RU48 225 aa13.62□□□□□ -0.23
COL9A3-206ENST00000466532 ADAP1O75689 374 aa13.62□□□□□ -0.23
COL9A3-206ENST00000466532 UBE2MP61081 183 aaKnown RBP13.62□□□□□ -0.23
COL9A3-206ENST00000466532 OXA1LQ15070 435 aa13.62□□□□□ -0.23
COL9A3-206ENST00000466532 AMTNQ6UX39 209 aa13.62□□□□□ -0.23
COL9A3-206ENST00000466532 IGF2BP2-AS1Q96M15 143 aa13.62□□□□□ -0.23
COL9A3-206ENST00000466532 A0A1B0GVY2 172 aa13.61□□□□□ -0.23
COL9A3-206ENST00000466532 POLR2GP62487 172 aaKnown RBP eCLIP13.61□□□□□ -0.23
COL9A3-206ENST00000466532 FGL1Q08830 312 aa13.61□□□□□ -0.23
COL9A3-206ENST00000466532 IGFL4Q6B9Z1 124 aa13.61□□□□□ -0.23
COL9A3-206ENST00000466532 TMEM144Q7Z5S9 345 aa13.61□□□□□ -0.23
COL9A3-206ENST00000466532 C9orf170A2RU37 121 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 PRSS29PA6NIE9 313 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 H3BRN7 92 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 RTL8CO15255 209 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
COL9A3-206ENST00000466532 IL5P05113 134 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 CNN1P51911 297 aaKnown RBP13.6□□□□□ -0.23
COL9A3-206ENST00000466532 ID3Q02535 119 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 LGALS9BQ3B8N2 356 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 CYP2G1PQ6ZSU1 146 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 RNF182Q8N6D2 247 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 SLC25A39Q9BZJ4 359 aaPredicted RBP13.6□□□□□ -0.23
COL9A3-206ENST00000466532 PSENENQ9NZ42 101 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 PKD1P98161 4303 aa13.6□□□□□ -0.23
COL9A3-206ENST00000466532 PKHD1P08F94 4074 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 IGLV2-18A0A075B6J9 118 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 TRAV8-2A0A0B4J237 113 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 INSP01308 110 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 INPP1P49441 399 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 RAP2BP61225 183 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 DAD1P61803 113 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 SPANXN2Q5MJ10 180 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 OR11H7Q8NGC8 314 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 SRRQ9GZT4 340 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 HIGD1AQ9Y241 93 aa13.59□□□□□ -0.23
COL9A3-206ENST00000466532 M0R2Z0 102 aa13.58□□□□□ -0.24
COL9A3-206ENST00000466532 SSSCA1O60232 199 aa13.58□□□□□ -0.24
COL9A3-206ENST00000466532 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
COL9A3-206ENST00000466532 PCLOQ9Y6V0 5065 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 DYNC1H1Q14204 4646 aaKnown RBP13.57□□□□□ -0.24
COL9A3-206ENST00000466532 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 ZNF705GA8MUZ8 300 aaPredicted RBP13.57□□□□□ -0.24
COL9A3-206ENST00000466532 CRXO43186 299 aaPredicted RBP13.57□□□□□ -0.24
COL9A3-206ENST00000466532 HYPMO75409 117 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 NDUFB6O95139 128 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 OR5G3P0C626 314 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 LINC00869P0C866 280 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 RPL7P18124 248 aaKnown RBP13.57□□□□□ -0.24
COL9A3-206ENST00000466532 TMEM88Q6PEY1 159 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 ZNF738Q8NE65 137 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 FLVCR2Q9UPI3 526 aa13.57□□□□□ -0.24
COL9A3-206ENST00000466532 NAP1L6A6NFF2 107 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 CCNKO75909 580 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 PRM2P04554 102 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 RRAS2P62070 204 aaPredicted RBP13.56□□□□□ -0.24
COL9A3-206ENST00000466532 SELENOTP62341 195 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 RNF212Q495C1 297 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 TRIQKQ629K1 86 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 SMIM8Q96KF7 97 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 UHRF2Q96PU4 802 aa13.56□□□□□ -0.24
COL9A3-206ENST00000466532 OR4E1P0C645 316 aa13.55□□□□□ -0.24
COL9A3-206ENST00000466532 METTL15P1P0C7V9 234 aa13.55□□□□□ -0.24
COL9A3-206ENST00000466532 PLP1P60201 277 aa13.55□□□□□ -0.24
COL9A3-206ENST00000466532 BAK1Q16611 211 aa13.55□□□□□ -0.24
COL9A3-206ENST00000466532 BAP18Q8IXM2 172 aa13.55□□□□□ -0.24
COL9A3-206ENST00000466532 TRAV12-2A0A075B6T6 113 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 LYRM9A8MSI8 78 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 BOLA2-SMG1P6H3BVE0 249 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 SCGB1D2O95969 90 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 B2MP61769 119 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 DLK1P80370 383 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 HIST1H1AQ02539 215 aaPredicted RBP13.54□□□□□ -0.24
COL9A3-206ENST00000466532 TMEM14EPQ6UXP3 125 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 Q6ZR54 194 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 ARL6Q9H0F7 186 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 RBM38Q9H0Z9 239 aaKnown RBP13.54□□□□□ -0.24
COL9A3-206ENST00000466532 NPVFQ9HCQ7 196 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 DNAH11Q96DT5 4516 aa13.54□□□□□ -0.24
COL9A3-206ENST00000466532 A0A087X0K7 114 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 LINC00854A0A1B0GVQ3 168 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 CXCL3P19876 107 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 RHOBP62745 196 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 C4orf46Q504U0 113 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 S100A7AQ86SG5 101 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 OR8A1Q8NGG7 326 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 LRRC20Q8TCA0 184 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 PPP1R14DQ9NXH3 145 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 MGAT4CQ9UBM8 478 aa13.53□□□□□ -0.24
COL9A3-206ENST00000466532 FNDC10F2Z333 226 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 DEFB130BP0DP73 79 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 DEFB130AP0DP74 79 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 ANXA7P20073 488 aaKnown RBP13.52□□□□□ -0.25
COL9A3-206ENST00000466532 TSPOP30536 169 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 SLC38A11Q08AI6 406 aa13.52□□□□□ -0.25
COL9A3-206ENST00000466532 PSG3Q16557 428 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms