RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.75□□□□□ -1.65
TPM3-214ENST00000466010 SMPXQ9UHP9 88 aa4.75□□□□□ -1.65
TPM3-214ENST00000466010 KCNIP3Q9Y2W7 256 aa4.75□□□□□ -1.65
TPM3-214ENST00000466010 DNAH9Q9NYC9 4486 aa4.75□□□□□ -1.65
TPM3-214ENST00000466010 TRAV2A0A0B4J234 112 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 IGHV3-35A0A0C4DH35 117 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 IGHV7-4-1A0A0J9YVY3 117 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 LCE6AA0A183 80 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 SMCO3A2RU48 225 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 RBMY1BA6NDE4 496 aaKnown RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 RBMY1EA6NEQ0 496 aaKnown RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 GSTZ1O43708 216 aaPredicted RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 IGKV1-39P01597 117 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 IGKV1D-39P04432 117 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 RBMY1DP0C7P1 496 aaKnown RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 P0C879 139 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 SLC25A4P12235 298 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 P2RY1P47900 373 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 MFAP2P55001 183 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 MUC21Q5SSG8 566 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 PVRIGQ6DKI7 326 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 ZNF600Q6ZNG1 722 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 CLVS1Q8IUQ0 354 aaPredicted RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 C15orf54Q8N8G6 183 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 RNASEH2CQ8TDP1 164 aaKnown RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 GALNT14Q96FL9 552 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 RHPN1-AS1Q9BWJ2 59 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 NAA50Q9GZZ1 169 aaKnown RBP4.74□□□□□ -1.65
TPM3-214ENST00000466010 NAA60Q9H7X0 242 aa4.74□□□□□ -1.65
TPM3-214ENST00000466010 CRYM-AS1A6NIL9 109 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 IGKV1-5P01602 117 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 NPPCP23582 126 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 NUP62P37198 522 aaPredicted RBP4.73□□□□□ -1.65
TPM3-214ENST00000466010 OPRK1P41145 380 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 TNFRSF9Q07011 255 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 SPCS2Q15005 226 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 ZNF575Q86XF7 245 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 BPIFCQ8NFQ6 507 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 OR4C5Q8NGB2 326 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 OR4X1Q8NH49 305 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 MARCH1Q8TCQ1 289 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 DYNC2LI1Q8TCX1 351 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 METTL26Q96S19 204 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 MIXL1Q9H2W2 232 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 TMEM56-RWDD3S4R434 201 aa4.73□□□□□ -1.65
TPM3-214ENST00000466010 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 IGHV3-21A0A0B4J1V1 117 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 A0A0B4J2A0 478 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 DUXBA0A1W2PPF3 345 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 ANKRD20A5PA0PJZ0 165 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 NUPR2A6NF83 97 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 FABP12A6NFH5 140 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 DNASE2O00115 360 aaPredicted RBP4.72□□□□□ -1.65
TPM3-214ENST00000466010 TMEM50AO95807 157 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 FABP1P07148 127 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 OR5AC1P0C628 307 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 SULT1A3P0DMM9 295 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 SULT1A4P0DMN0 295 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 RNASE2P10153 161 aaKnown RBP4.72□□□□□ -1.65
TPM3-214ENST00000466010 S100A5P33763 92 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 ETV6P41212 452 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 CCR6P51684 374 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 AP2S1P53680 142 aaPredicted RBP4.72□□□□□ -1.65
TPM3-214ENST00000466010 BSXQ3C1V8 233 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 SP6Q3SY56 376 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 C2orf83Q53S99 150 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 ZFAND6Q6FIF0 208 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 TOMM20LQ6UXN7 152 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 OR51S1Q8NGJ8 323 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 OR4C16Q8NGL9 310 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 GLYATL2Q8WU03 294 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 RNF2Q99496 336 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 RTBDNQ9BSG5 229 aaPredicted RBP4.72□□□□□ -1.65
TPM3-214ENST00000466010 SLIRPQ9GZT3 109 aaKnown RBP4.72□□□□□ -1.65
TPM3-214ENST00000466010 WFDC10AQ9H1F0 79 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 VSIRQ9H7M9 311 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 MCUBQ9NWR8 336 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 SHPKQ9UHJ6 478 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 PUS1Q9Y606 427 aaKnown RBP eCLIP4.72□□□□□ -1.65
TPM3-214ENST00000466010 U3KQ87 197 aa4.72□□□□□ -1.65
TPM3-214ENST00000466010 CSMD3Q7Z407 3707 aa4.71□□□□□ -1.65
TPM3-214ENST00000466010 PMS2P5A8MQ11 134 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 CEBPZOSA8MTT3 80 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 MPTX1A8MV57 137 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 H3BMQ9 156 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 ZNF701M0R085 212 aaPredicted RBP4.71□□□□□ -1.66
TPM3-214ENST00000466010 NXPH4O95158 308 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 CA1P00915 261 aaPredicted RBP4.71□□□□□ -1.66
TPM3-214ENST00000466010 SNRPCP09234 159 aaKnown RBP4.71□□□□□ -1.66
TPM3-214ENST00000466010 CRYBB3P26998 211 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 YPEL3P61236 119 aaPredicted RBP4.71□□□□□ -1.66
TPM3-214ENST00000466010 ARL16Q0P5N6 197 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 NMSQ5H8A3 153 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 TCF24Q7RTU0 167 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 SELENOHQ8IZQ5 122 aaKnown RBP4.71□□□□□ -1.66
TPM3-214ENST00000466010 LGI3Q8N145 548 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 OR1S2Q8NGQ3 325 aa4.71□□□□□ -1.66
TPM3-214ENST00000466010 OR1B1Q8NGR6 318 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms