RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 PIGBOS1A0A0B4J2F0 54 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 DUXBA0A1W2PPF3 345 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 CCSO14618 274 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 PRAF2O60831 178 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 SULT1A3P0DMM9 295 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 SULT1A4P0DMN0 295 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 HSPE1P61604 102 aaKnown RBP10.34□□□□□ -0.75
HDAC6-214ENST00000465269 USF2Q15853 346 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-214ENST00000465269 TTC32Q5I0X7 151 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF114Q8NC26 417 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 OR1S1Q8NH92 325 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 PDCD10Q9BUL8 212 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 U3KQE9 123 aa10.34□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF705GA8MUZ8 300 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-214ENST00000465269 SNRPGP15A8MWD9 76 aa10.33□□□□□ -0.76
HDAC6-214ENST00000465269 F6UB75 175 aa10.33□□□□□ -0.76
HDAC6-214ENST00000465269 SMCO1Q147U7 214 aa10.33□□□□□ -0.76
HDAC6-214ENST00000465269 NARS2Q96I59 477 aaKnown RBP10.33□□□□□ -0.76
HDAC6-214ENST00000465269 FNDC4Q9H6D8 234 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-214ENST00000465269 GOLT1BQ9Y3E0 138 aa10.33□□□□□ -0.76
HDAC6-214ENST00000465269 TNFRSF18Q9Y5U5 241 aa10.33□□□□□ -0.76
HDAC6-214ENST00000465269 FAM25EA8MYX2 175 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 IGKV1-17P01599 117 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 SERTAD4-AS1Q5TG53 156 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 LINC00052Q96N35 136 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 NRN1Q9NPD7 142 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 GSKIPQ9P0R6 139 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 ALG5Q9Y673 324 aa10.32□□□□□ -0.76
HDAC6-214ENST00000465269 C5orf51A6NDU8 294 aa10.31□□□□□ -0.76
HDAC6-214ENST00000465269 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-214ENST00000465269 SSNA1O43805 119 aa10.31□□□□□ -0.76
HDAC6-214ENST00000465269 EIF2B2P49770 351 aaKnown RBP10.31□□□□□ -0.76
HDAC6-214ENST00000465269 PRCDQ00LT1 54 aa10.31□□□□□ -0.76
HDAC6-214ENST00000465269 SYT8Q8NBV8 401 aa10.31□□□□□ -0.76
HDAC6-214ENST00000465269 SAV1Q9H4B6 383 aaPredicted RBP10.31□□□□□ -0.76
HDAC6-214ENST00000465269 CEBPZOSA8MTT3 80 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 PITX3O75364 302 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 CLN5O75503 358 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 SIX6O95475 246 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 SLC25A6P12236 298 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 NKX2-1P43699 371 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-214ENST00000465269 SPCS3P61009 180 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 ESRGQ1W209 222 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 IAH1Q2TAA2 248 aaPredicted RBP10.3□□□□□ -0.76
HDAC6-214ENST00000465269 OR52E5Q8NH55 327 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 MAGT1Q9H0U3 335 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 RBKSQ9H477 322 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 ENY2Q9NPA8 101 aa10.3□□□□□ -0.76
HDAC6-214ENST00000465269 C7orf66A4D0T2 115 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 GOSR2O14653 212 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 HNRNPCP07910 306 aaKnown RBP eCLIP10.29□□□□□ -0.76
HDAC6-214ENST00000465269 AZU1P20160 251 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 HOXA1P49639 335 aaPredicted RBP10.29□□□□□ -0.76
HDAC6-214ENST00000465269 ERHP84090 104 aaKnown RBP10.29□□□□□ -0.76
HDAC6-214ENST00000465269 AARDQ4LEZ3 155 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 SIGLEC15Q6ZMC9 328 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 TMEM208Q9BTX3 173 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 HSPB7Q9UBY9 170 aa10.29□□□□□ -0.76
HDAC6-214ENST00000465269 SCGB1D2O95969 90 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 IFNA5P01569 189 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 PSG9Q00887 426 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 FAM78BQ5VT40 261 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 ZBTB8BQ8NAP8 495 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-214ENST00000465269 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 C2orf50Q96LR7 162 aa10.28□□□□□ -0.76
HDAC6-214ENST00000465269 HEYLQ9NQ87 328 aaPredicted RBP10.28□□□□□ -0.76
HDAC6-214ENST00000465269 A0A0J9YY99 117 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 PLAC8L1A1L4L8 177 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 LYRM9A8MSI8 78 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 ATP5G1P05496 136 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 RNASE2P10153 161 aaKnown RBP10.27□□□□□ -0.77
HDAC6-214ENST00000465269 IAPPP10997 89 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 SNCAP37840 140 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 ATP5G3P48201 142 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 AP2S1P53680 142 aaPredicted RBP10.27□□□□□ -0.77
HDAC6-214ENST00000465269 ERVFC1-1P60608 527 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 ID3Q02535 119 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 CDPF1Q6NVV7 123 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 FOXI2Q6ZQN5 318 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 MED28Q9H204 178 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 MGAT4CQ9UBM8 478 aa10.27□□□□□ -0.77
HDAC6-214ENST00000465269 A0A1W2PPQ1 181 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 WRBO00258 174 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 SYNGR2O43760 224 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 OPRK1P41145 380 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 POLR2GP62487 172 aaKnown RBP eCLIP10.26□□□□□ -0.77
HDAC6-214ENST00000465269 OR4X1Q8NH49 305 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 DTD1Q8TEA8 209 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 CACFD1Q9UGQ2 172 aa10.26□□□□□ -0.77
HDAC6-214ENST00000465269 TRAV26-1A0A087WT03 109 aa10.25□□□□□ -0.77
HDAC6-214ENST00000465269 INS-IGF2F8WCM5 200 aa10.25□□□□□ -0.77
HDAC6-214ENST00000465269 EREGO14944 169 aa10.25□□□□□ -0.77
HDAC6-214ENST00000465269 BUB3O43684 328 aa10.25□□□□□ -0.77
HDAC6-214ENST00000465269 MED6O75586 246 aa10.25□□□□□ -0.77
HDAC6-214ENST00000465269 MBPP02686 304 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-214ENST00000465269 CXCL3P19876 107 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms