RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 PXMP4Q9Y6I8 212 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 IGKV3-7A0A075B6H7 116 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 LOC102724200A0A096LPH7 203 aaPredicted RBP10.17□□□□□ -0.78
LIMD1-203ENST00000465039 UBE2CO00762 179 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 ID1P41134 155 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 TFPI2P48307 235 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 SPATA31B1PQ5VZV4 182 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 PATE2Q6UY27 113 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 LINC00305Q7Z4B0 112 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 SCRT1Q9BWW7 348 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 DOK5Q9P104 306 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 TNFSF18Q9UNG2 199 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 SELENOKQ9Y6D0 94 aa10.17□□□□□ -0.78
LIMD1-203ENST00000465039 DNAH9Q9NYC9 4486 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 SOCS3O14543 225 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 HAGHQ16775 308 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 MIC13Q5XKP0 118 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 BPIFA4PQ86YQ2 179 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 SBSPONQ8IVN8 264 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 SCGB1C1Q8TD33 95 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 TMEM37Q8WXS4 190 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 UHRF2Q96PU4 802 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 SPATA25Q9BR10 227 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 WFDC10AQ9H1F0 79 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 ZMAT4Q9H898 229 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 SLC25A22Q9H936 323 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 TIMM9Q9Y5J7 89 aa10.16□□□□□ -0.78
LIMD1-203ENST00000465039 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
LIMD1-203ENST00000465039 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
LIMD1-203ENST00000465039 G3V3Q6 166 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
LIMD1-203ENST00000465039 ATF4P18848 351 aaPredicted RBP10.15□□□□□ -0.78
LIMD1-203ENST00000465039 GUK1Q16774 197 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 Q6ZNX1 250 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 Q6ZWC4 215 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 CLUHP3Q96NS8 147 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.78
LIMD1-203ENST00000465039 CLEC5AQ9NY25 188 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 TP53TG1Q9Y2A0 90 aa10.15□□□□□ -0.78
LIMD1-203ENST00000465039 FXYD6-FXYD2A0A087WZ82 144 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 RNF222A6NCQ9 220 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 TAAR5O14804 337 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 MRPS12O15235 138 aaKnown RBP10.14□□□□□ -0.79
LIMD1-203ENST00000465039 ZNF253O75346 499 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 ZNF688P0C7X2 276 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 DEFB131AP59861 70 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 ZNF345Q14585 488 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 LCN15Q6UWW0 184 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 WFDC3Q8IUB2 231 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 FAM24BQ8N5W8 94 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 CITED4Q96RK1 184 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 PSMG3Q9BT73 122 aaPredicted RBP10.14□□□□□ -0.79
LIMD1-203ENST00000465039 TMEM14CQ9P0S9 112 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 UBQLN2Q9UHD9 624 aa10.14□□□□□ -0.79
LIMD1-203ENST00000465039 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 SPP1P10451 314 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 Q5BKY6 102 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 PSMG4Q5JS54 123 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 LEMD1Q68G75 181 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 MORN3Q6PF18 240 aaPredicted RBP10.13□□□□□ -0.79
LIMD1-203ENST00000465039 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 OR2G3Q8NGZ4 309 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 SLC50A1Q9BRV3 221 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 RSG1Q9BU20 258 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 HRH4Q9H3N8 390 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 U3KQK5 164 aa10.13□□□□□ -0.79
LIMD1-203ENST00000465039 BORCS7-ASMTA0A0B4J1R7 106 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 PDE6HQ13956 83 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 FOXI2Q6ZQN5 318 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
LIMD1-203ENST00000465039 APRG1Q8IVJ8 170 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 C16orf92Q96LL3 132 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 SMIM3Q9BZL3 60 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 RPRMQ9NS64 109 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 TENM3Q9P273 2699 aa10.12□□□□□ -0.79
LIMD1-203ENST00000465039 JTBO76095 146 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 HLA-DRB4P13762 266 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 NUTF2P61970 127 aaKnown RBP10.11□□□□□ -0.79
LIMD1-203ENST00000465039 SERF2P84101 59 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 STHQ8IWL8 128 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 GNPNAT1Q96EK6 184 aaPredicted RBP10.11□□□□□ -0.79
LIMD1-203ENST00000465039 C17orf77Q96MU5 243 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 WFDC1Q9HC57 220 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 HLA-DRB4X5D2U9 266 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 NBEAL2Q6ZNJ1 2754 aa10.11□□□□□ -0.79
LIMD1-203ENST00000465039 ARPC5O15511 151 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 MBP02144 154 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 TAS2R45P59539 299 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 RHOBP62745 196 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 TCTE3Q8IZS6 198 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 RCHY1Q96PM5 261 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 ASCL2Q99929 193 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 CSTL1Q9H114 145 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
LIMD1-203ENST00000465039 FUT9Q9Y231 359 aa10.1□□□□□ -0.79
LIMD1-203ENST00000465039 A8MTW9 85 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms