RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 ZNF418Q8TF45 676 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-205ENST00000464541 FGF13Q92913 245 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 PPP3R2Q96LZ3 170 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 PRELID3AQ96N28 172 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TNFSF18Q9UNG2 199 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 SOX21Q9Y651 276 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-205ENST00000464541 TNS3Q68CZ2 1445 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 THADAQ6YHU6 1953 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 EIF4G3O43432 1585 aaKnown RBP2.49□□□□□ -2.01
PTCD3-205ENST00000464541 REREQ9P2R6 1566 aa2.49□□□□□ -2.01
PTCD3-205ENST00000464541 ZSWIM8A7E2V4 1837 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 BBIP1A8MTZ0 92 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 C17orf98A8MV24 154 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 NPFFO15130 113 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 RER1O15258 196 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 IGLC6P0CF74 106 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 ZNF705BP0CI00 300 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-205ENST00000464541 CRYGSP22914 178 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 RPL28P46779 137 aaKnown RBP2.48□□□□□ -2.01
PTCD3-205ENST00000464541 KISS1Q15726 138 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 OCIAD2Q56VL3 154 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 Q6ZS52 159 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 OR10AC1Q8NH08 325 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 NAT14Q8WUY8 206 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 LINC00467Q9BRT7 94 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 TMEM191AQ9H0A3 160 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 BANF2Q9H503 90 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 RERGLQ9H628 205 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 CCDC167Q9P0B6 97 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 FAM215AQ9Y5M1 114 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 SPATA31E1Q6ZUB1 1445 aa2.48□□□□□ -2.01
PTCD3-205ENST00000464541 DSPPQ9NZW4 1301 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 UHRF1BP1LA0JNW5 1464 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 SCRIBQ14160 1630 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 ADAMTSL1Q8N6G6 1762 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 TRAV7A0A075B6U4 112 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 MDFIC2A0A1B0GVS7 189 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 C9orf170A2RU37 121 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 UQCRQO14949 82 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 PSCAO43653 123 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 SYNGR2O43760 224 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 APODP05090 189 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 ZNF728P0DKX0 622 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 LINC00694P0DN24 101 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 FUSP35637 526 aaKnown RBP eCLIP2.47□□□□□ -2.01
PTCD3-205ENST00000464541 RBP2P50120 134 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 FOXA1P55317 472 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 MRPS36P82909 103 aaKnown RBP2.47□□□□□ -2.01
PTCD3-205ENST00000464541 QRFPP83859 136 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 FAM229BQ4G0N7 80 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 TMEM155Q4W5P6 130 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 SLC35E3Q7Z769 313 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 OR8B2Q96RD0 313 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 PSMG3Q9BT73 122 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-205ENST00000464541 DUSP21Q9H596 190 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 C16orf95Q9H693 158 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 RIC1Q4ADV7 1423 aa2.47□□□□□ -2.01
PTCD3-205ENST00000464541 MED1Q15648 1581 aaPredicted RBP2.47□□□□□ -2.01
PTCD3-205ENST00000464541 PRG4Q92954 1404 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-205ENST00000464541 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.46□□□□□ -2.02
PTCD3-205ENST00000464541 TRBV10-2A0A0K0K1G8 114 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 LY6LH3BQJ8 138 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 H7C2G1 150 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 J3QRE1 110 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 CORTO00230 105 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 CDC42EP2O14613 210 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 LYRM1O43325 122 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 TPT1P13693 172 aaKnown RBP2.46□□□□□ -2.02
PTCD3-205ENST00000464541 HIST1H1BP16401 226 aaKnown RBP2.46□□□□□ -2.02
PTCD3-205ENST00000464541 DYNLT1P63172 113 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 SUPT4H1P63272 117 aaKnown RBP2.46□□□□□ -2.02
PTCD3-205ENST00000464541 AAED1Q7RTV5 226 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 WFDC11Q8NEX6 87 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 C14orf144Q96I85 54 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 HIGD2AQ9BW72 106 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 DSCAMO60469 2012 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 NUP205Q92621 2012 aa2.46□□□□□ -2.02
PTCD3-205ENST00000464541 CEP164Q9UPV0 1460 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF106Q9H2Y7 1883 aaKnown RBP2.45□□□□□ -2.02
PTCD3-205ENST00000464541 XIRP1Q702N8 1843 aaKnown RBP2.45□□□□□ -2.02
PTCD3-205ENST00000464541 FGD6Q6ZV73 1430 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 TRAV27A0A087WT01 109 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 A0A1B0GU33 70 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 ZNF670-ZNF695F2Z2N8 137 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 K7ERJ3 54 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 GNRH2O43555 120 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 PGLYRP1O75594 196 aaPredicted RBP2.45□□□□□ -2.02
PTCD3-205ENST00000464541 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 FGF7P21781 194 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 AKR1D1P51857 326 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 KLRD1Q13241 179 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 SOSTDC1Q6X4U4 206 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 C7orf65Q6ZTY9 151 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 ATOH7Q8N100 152 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 FAM216BQ8N7L0 139 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 Q8NAQ8 132 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 MORN4Q8NDC4 146 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 ZC2HC1AQ96GY0 325 aa2.45□□□□□ -2.02
PTCD3-205ENST00000464541 SPANXDQ9BXN6 97 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms