RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 GAGE12JA6NER3 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 NPIPB5A8MRT5 1133 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 VSTM5A8MXK1 200 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE7O76087 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 NCR2O95944 276 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE12FP0CL80 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE12GP0CL81 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE12IP0CL82 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 MAGEA5P43359 124 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GAGE4Q13068 117 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM95Q3KNT9 176 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM178AQ8NBL3 297 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 TTTY12Q9BZ98 90 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 RNF7Q9UBF6 113 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 TRGV5A0A0B4J1U4 118 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 K7ESF4 209 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 ENSAO43768 121 aaKnown RBP3.11□□□□□ -1.91
CCNL1-204ENST00000464316 RPL27AP46776 148 aaKnown RBP3.11□□□□□ -1.91
CCNL1-204ENST00000464316 PSMB2P49721 201 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF134P52741 427 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 HERVK_113P61574 105 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 LYZL1Q6UWQ5 148 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 PATE2Q6UY27 113 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 GTSCR1Q86UQ5 136 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 C11orf53Q8IXP5 236 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 CNEP1R1Q8N9A8 125 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 ZNRF1Q8ND25 227 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 LEAP2Q969E1 77 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 METRNQ9UJH8 293 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 ASXL3Q9C0F0 2248 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 K7ERJ3 54 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 LYZL6O75951 148 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 RBP4P02753 201 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 ASIPP42127 132 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 SSBP2P81877 361 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-204ENST00000464316 MORN5Q5VZ52 161 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 LINC00696Q6ZRV3 163 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 AMN1Q8IY45 258 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 C1orf162Q8NEQ5 155 aaPredicted RBP3.11□□□□□ -1.91
CCNL1-204ENST00000464316 SPANXDQ9BXN6 97 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 NGBQ9NPG2 151 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 DKK2Q9UBU2 259 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 RPUSD1Q9UJJ7 312 aaKnown RBP3.11□□□□□ -1.91
CCNL1-204ENST00000464316 KNTC1P50748 2209 aa3.11□□□□□ -1.91
CCNL1-204ENST00000464316 TMSB15BA0A087X1C1 80 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 TMEM8BA6NDV4 472 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 TSPAN13O95857 204 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 ZNF688P0C7X2 276 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MYOD1P15172 320 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 ATP5G2Q06055 141 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
CCNL1-204ENST00000464316 PRR31Q5SQ13 230 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MOGAT3Q86VF5 341 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 PGPEP1Q9NXJ5 209 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 TNRC6AQ8NDV7 1962 aaKnown RBP3.1□□□□□ -1.91
CCNL1-204ENST00000464316 IGKV1D-17A0A075B6S4 117 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 TRAV8-1A0A0A6YYK1 113 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 LINC01619G3V211 115 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 H3BTX0 84 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 H3BVH4 76 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 ORM1P02763 201 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 CXCL12P48061 93 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 ASPHD1Q5U4P2 390 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MBNL2Q5VZF2 373 aaKnown RBP3.1□□□□□ -1.91
CCNL1-204ENST00000464316 AMTNQ6UX39 209 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 LINC00322Q6ZN03 302 aaPredicted RBP3.1□□□□□ -1.91
CCNL1-204ENST00000464316 Q6ZT83 130 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 Q6ZUT4 128 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 TEN1Q86WV5 123 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 FAM169BQ8N8A8 192 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 DEFB108BQ8NET1 73 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 RAX2Q96IS3 184 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 UFC1Q9Y3C8 167 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 U3KQK5 164 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 SDK1Q7Z5N4 2213 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 FAM186AA6NE01 2351 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 IGHV3OR15-7A0A075B7D8 119 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 B5MCH6 92 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 K7EM74 188 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 IGHV3-48P01763 117 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 CFIP05156 583 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 CCL4P13236 92 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MEOX1P50221 254 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 PDE6HQ13956 83 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 PAPPA-AS1Q5QFB9 102 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 WFDC3Q8IUB2 231 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 RNF183Q96D59 192 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 C20orf78Q9BR46 151 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 DEFB127Q9H1M4 99 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 SS18L2Q9UHA2 77 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 RAXQ9Y2V3 346 aa3.1□□□□□ -1.91
CCNL1-204ENST00000464316 MYMXA0A1B0GTQ4 84 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 PINLYPA6NC86 204 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 LINC01549A6NIU2 74 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 H7C1H1 209 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 SPRY3O43610 288 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 IGKV1-16P04430 117 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 THBDP07204 575 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 GP9P14770 177 aa3.09□□□□□ -1.91
CCNL1-204ENST00000464316 ODF1Q14990 250 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms