RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 C2CD3Q4AC94 2353 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 IGHV3-66A0A0C4DH42 116 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 H3BQ15 152 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
GYPC-205ENST00000464053 DEFB136Q30KP8 78 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 KHDC1LQ5JSQ8 128 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 TMEM14CQ9P0S9 112 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 RNF114Q9Y508 228 aa11.82□□□□□ -0.52
GYPC-205ENST00000464053 ZNF320A2RRD8 509 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 ZP3P21754 424 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 CRYBB3P26998 211 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 CYB561D1Q8N8Q1 229 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 OR4F5Q8NH21 305 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 BLNKQ8WV28 456 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 TMEM190Q8WZ59 177 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 OR4F4Q96R69 305 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 METTL26Q96S19 204 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 SLC35B3Q9H1N7 401 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 SMDT1Q9H4I9 107 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 BUB3O43684 328 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 NPPCP23582 126 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 CEBPGP53567 150 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 PROK1P58294 105 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 BPIFA4PQ86YQ2 179 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 GPHB5Q86YW7 130 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 ZNF586Q9NXT0 402 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 U3KQE9 123 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 MAST4O15021 2626 aa11.81□□□□□ -0.52
GYPC-205ENST00000464053 KRBOX1C9JBD0 128 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 NBEAP1P0C6P0 100 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 TAGLN2P37802 199 aaKnown RBP11.8□□□□□ -0.52
GYPC-205ENST00000464053 RPEL1Q2QD12 228 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 S100A7AQ86SG5 101 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 C4orf3Q8WVX3 66 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 C17orf77Q96MU5 243 aa11.8□□□□□ -0.52
GYPC-205ENST00000464053 GGTLC3B5MD39 225 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 F8W036 122 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 IGLC2P0DOY2 106 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 EDN2P20800 178 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 TM4SF20Q53R12 229 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 OR8I2Q8N0Y5 310 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 KLHL30-AS1Q8NEE0 82 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 DUX3Q96PT4 197 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 CITED2Q99967 270 aaPredicted RBP11.79□□□□□ -0.52
GYPC-205ENST00000464053 SMAD5-AS1Q9Y6J3 95 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 HIST1H1EP10412 219 aaKnown RBP11.79□□□□□ -0.52
GYPC-205ENST00000464053 HOXD3P31249 432 aaPredicted RBP11.79□□□□□ -0.52
GYPC-205ENST00000464053 FAM106AQ4KMX7 169 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 C10orf91Q5T1B1 145 aa11.79□□□□□ -0.52
GYPC-205ENST00000464053 JMJD1CQ15652 2540 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 A0A1W2PRX2 142 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 RANP62826 216 aaKnown RBP11.78□□□□□ -0.52
GYPC-205ENST00000464053 C8orf86Q6ZUL3 223 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 CCDC28AQ8IWP9 274 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 OR11H1Q8NG94 326 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 OR4F17Q8NGA8 305 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
GYPC-205ENST00000464053 NDUFB4O95168 129 aa11.77□□□□□ -0.52
GYPC-205ENST00000464053 SLURP1P55000 103 aa11.77□□□□□ -0.52
GYPC-205ENST00000464053 SYNJ2BPP57105 145 aa11.77□□□□□ -0.52
GYPC-205ENST00000464053 SUMO1P63165 101 aaKnown RBP11.77□□□□□ -0.52
GYPC-205ENST00000464053 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.52
GYPC-205ENST00000464053 SEC11CQ9BY50 192 aa11.77□□□□□ -0.52
GYPC-205ENST00000464053 TRBV19A0A075B6N1 114 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 SCO2A0A1W2PP80 73 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 SLC17A3O00476 420 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 APOC3P02656 99 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 RPL7P18124 248 aaKnown RBP11.76□□□□□ -0.53
GYPC-205ENST00000464053 S100A7P31151 101 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 MYCNOSP40205 109 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 SOHLH1Q5JUK2 328 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 OR1N2Q8NGR9 330 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 DAZ1Q9NQZ3 744 aaKnown RBP11.76□□□□□ -0.53
GYPC-205ENST00000464053 LINC01619G3V211 115 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 TMEM250H0YL14 139 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 GUCA2BQ16661 112 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 C1orf194Q5T5A4 169 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 C16orf54Q6UWD8 224 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.76□□□□□ -0.53
GYPC-205ENST00000464053 TXNDC17Q9BRA2 123 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 ELOVL1Q9BW60 279 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 CARHSP1Q9Y2V2 147 aaKnown RBP11.76□□□□□ -0.53
GYPC-205ENST00000464053 SELENOKQ9Y6D0 94 aa11.76□□□□□ -0.53
GYPC-205ENST00000464053 IGHV7-4-1A0A0J9YVY3 117 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 K7EMT4 169 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 PDE6DO43924 150 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 KLF5Q13887 457 aaPredicted RBP11.75□□□□□ -0.53
GYPC-205ENST00000464053 WFDC12Q8WWY7 111 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
GYPC-205ENST00000464053 Q9H3A6 140 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 RNF24Q9Y225 148 aa11.75□□□□□ -0.53
GYPC-205ENST00000464053 TSSC4Q9Y5U2 329 aaPredicted RBP11.75□□□□□ -0.53
GYPC-205ENST00000464053 TMEM213A2RRL7 107 aa11.74□□□□□ -0.53
GYPC-205ENST00000464053 PGPA6NDG6 321 aa11.74□□□□□ -0.53
GYPC-205ENST00000464053 REC114Q7Z4M0 266 aa11.74□□□□□ -0.53
GYPC-205ENST00000464053 EXOC3-AS1Q8N2X6 119 aa11.74□□□□□ -0.53
GYPC-205ENST00000464053 GLMPQ8WWB7 406 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms