RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SAMD13Q5VXD3 122 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 TMEM144Q7Z5S9 345 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 OR4D5Q8NGN0 318 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 OR1B1Q8NGR6 318 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 RPRMQ9NS64 109 aa13.52□□□□□ -0.25
SF3A1-205ENST00000463818 FRAS1Q86XX4 4008 aa13.51□□□□□ -0.25
SF3A1-205ENST00000463818 SMCO3A2RU48 225 aa13.51□□□□□ -0.25
SF3A1-205ENST00000463818 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
SF3A1-205ENST00000463818 SPART-AS1P0CW21 52 aa13.51□□□□□ -0.25
SF3A1-205ENST00000463818 SMIM8Q96KF7 97 aa13.51□□□□□ -0.25
SF3A1-205ENST00000463818 TRAV6A0A075B6T7 132 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 PMS2P5A8MQ11 134 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 IL5P05113 134 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 H2AFB2P0C5Z0 115 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 S100A7P31151 101 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 CYP2G1PQ6ZSU1 146 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 GPR82Q96P67 336 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 SCRT1Q9BWW7 348 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 RFNGQ9Y644 331 aa13.5□□□□□ -0.25
SF3A1-205ENST00000463818 SSSCA1O60232 199 aa13.49□□□□□ -0.25
SF3A1-205ENST00000463818 C1orf158Q8N1D5 194 aa13.49□□□□□ -0.25
SF3A1-205ENST00000463818 ZNF431Q8TF32 576 aaPredicted RBP13.49□□□□□ -0.25
SF3A1-205ENST00000463818 DOK5Q9P104 306 aa13.49□□□□□ -0.25
SF3A1-205ENST00000463818 GOLT1BQ9Y3E0 138 aa13.49□□□□□ -0.25
SF3A1-205ENST00000463818 CCNKO75909 580 aa13.48□□□□□ -0.25
SF3A1-205ENST00000463818 AMBPP02760 352 aa13.48□□□□□ -0.25
SF3A1-205ENST00000463818 IGFL4Q6B9Z1 124 aa13.48□□□□□ -0.25
SF3A1-205ENST00000463818 NRARPQ7Z6K4 114 aa13.48□□□□□ -0.25
SF3A1-205ENST00000463818 SLC25A39Q9BZJ4 359 aaPredicted RBP13.48□□□□□ -0.25
SF3A1-205ENST00000463818 TRAV8-2A0A0B4J237 113 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 HYPMO75409 117 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 RAP2BP61225 183 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 RRAS2P62070 204 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-205ENST00000463818 FGL1Q08830 312 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 IAH1Q2TAA2 248 aaPredicted RBP13.47□□□□□ -0.25
SF3A1-205ENST00000463818 TMEM14EPQ6UXP3 125 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 ENKURQ8TC29 256 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 MARVELD1Q9BSK0 173 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 SHANK2-AS3Q9BTD1 123 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 NDUFAF3Q9BU61 184 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 PLA2G2EQ9NZK7 142 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 GSKIPQ9P0R6 139 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 DKK2Q9UBU2 259 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 HIGD1AQ9Y241 93 aa13.47□□□□□ -0.25
SF3A1-205ENST00000463818 A8MTW9 85 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 H3BRN7 92 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 SCGB1D2O95969 90 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 HBE1P02100 147 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 METTL15P1P0C7V9 234 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 DEFA1P59665 94 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 DEFA3P59666 94 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 SELENOTP62341 195 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 DLK1P80370 383 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 FAM222AQ5U5X8 452 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 AMTNQ6UX39 209 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 SEC22CQ9BRL7 303 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 NPVFQ9HCQ7 196 aa13.46□□□□□ -0.25
SF3A1-205ENST00000463818 DNAH6Q9C0G6 4158 aa13.46□□□□□ -0.26
SF3A1-205ENST00000463818 OR5G3P0C626 314 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 LINC00869P0C866 280 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 PLP1P60201 277 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 RNF182Q8N6D2 247 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 ZBTB8BQ8NAP8 495 aaPredicted RBP13.45□□□□□ -0.26
SF3A1-205ENST00000463818 OR10P1Q8NGE3 313 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 IGF2BP2-AS1Q96M15 143 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 NIPSNAP3BQ9BS92 247 aa13.45□□□□□ -0.26
SF3A1-205ENST00000463818 LOC102723971A0A1B0GUV8 181 aa13.44□□□□□ -0.26
SF3A1-205ENST00000463818 PRAF2O60831 178 aa13.44□□□□□ -0.26
SF3A1-205ENST00000463818 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
SF3A1-205ENST00000463818 RPL7P18124 248 aaKnown RBP13.44□□□□□ -0.26
SF3A1-205ENST00000463818 CNN1P51911 297 aaKnown RBP13.44□□□□□ -0.26
SF3A1-205ENST00000463818 TAS2R30P59541 319 aa13.44□□□□□ -0.26
SF3A1-205ENST00000463818 RRN3P1Q2M238 152 aa13.44□□□□□ -0.26
SF3A1-205ENST00000463818 C12orf45Q8N5I9 185 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-205ENST00000463818 TEX48A0A1B0GUV7 120 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 FNDC10F2Z333 226 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 P0DMU3 169 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 FAM231AP0DMU4 169 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 FAM231CP0DMU5 169 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 PATE2Q6UY27 113 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 POM121L12Q8N7R1 296 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 OR11H7Q8NGC8 314 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 TMEM208Q9BTX3 173 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 ARL6Q9H0F7 186 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 MGAT4CQ9UBM8 478 aa13.43□□□□□ -0.26
SF3A1-205ENST00000463818 YTHDF2Q9Y5A9 579 aaKnown RBP13.43□□□□□ -0.26
SF3A1-205ENST00000463818 TSC22D2O75157 780 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 MBPP02686 304 aaPredicted RBP13.42□□□□□ -0.26
SF3A1-205ENST00000463818 ARL16Q0P5N6 197 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 IL15RAQ13261 267 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 TEPPQ6URK8 271 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 S100A7AQ86SG5 101 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 ZNF738Q8NE65 137 aa13.42□□□□□ -0.26
SF3A1-205ENST00000463818 RCL1Q9Y2P8 373 aaKnown RBP13.42□□□□□ -0.26
SF3A1-205ENST00000463818 C7orf66A4D0T2 115 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 K7EPK0 472 aa13.41□□□□□ -0.26
SF3A1-205ENST00000463818 M0R2Z0 102 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms