RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 ZNF48Q96MX3 618 aaPredicted RBP7.8□□□□□ -1.16
PTPRD-207ENST00000463477 TMEM14CQ9P0S9 112 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 KLF12Q9Y4X4 402 aa7.8□□□□□ -1.16
PTPRD-207ENST00000463477 I3L2K1 104 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 PYYP10082 97 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 GZMBP10144 247 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 PKIAP61925 76 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 SRSF2Q01130 221 aaKnown RBP7.79□□□□□ -1.16
PTPRD-207ENST00000463477 Q0VG73 95 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 OR5I1Q13606 314 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 TMEM183BQ1AE95 376 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 BRD3OSQ6XYD6 125 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 SIGLECL1Q8N7X8 197 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 MRPL18Q9H0U6 180 aaKnown RBP7.79□□□□□ -1.16
PTPRD-207ENST00000463477 FBXL15Q9H469 300 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 ESM1Q9NQ30 184 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 TIMM23O14925 209 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 NBR2O15453 112 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 MOSP00540 346 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 IGLC1P0CG04 106 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 GP9P14770 177 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 UBE2E1P51965 193 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 PAFAH1B2P68402 229 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 CDPF1Q6NVV7 123 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 WIPF2Q8TF74 440 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-207ENST00000463477 RBM14Q96PK6 669 aaKnown RBP7.79□□□□□ -1.16
PTPRD-207ENST00000463477 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
PTPRD-207ENST00000463477 SOX21Q9Y651 276 aaPredicted RBP7.79□□□□□ -1.16
PTPRD-207ENST00000463477 IZUMO1RA6ND01 250 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 GATCO43716 136 aaKnown RBP7.78□□□□□ -1.16
PTPRD-207ENST00000463477 HLA-DQA1P01909 254 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 NBEAP1P0C6P0 100 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 CBLN1P23435 193 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 DEFB112Q30KQ8 113 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 LDLRAD2Q5SZI1 272 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 MINOS1Q5TGZ0 78 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 RUSC1-AS1Q66K80 236 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 CCDC144NLQ6NUI1 221 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 Q6YL49 198 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 OR8I2Q8N0Y5 310 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 C5orf17Q8NAS9 161 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 OR1B1Q8NGR6 318 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 RNASE7Q9H1E1 156 aaKnown RBP7.78□□□□□ -1.16
PTPRD-207ENST00000463477 RNF24Q9Y225 148 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 HIGD1AQ9Y241 93 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 MINOS1-NBL1R4GNA1 71 aa7.78□□□□□ -1.16
PTPRD-207ENST00000463477 TRBV6-1A0A0K0K1D8 114 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 SNURFLB1AK76 121 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 FCN1O00602 326 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 IGHV3-48P01763 117 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 AMY1AP04745 511 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 CRISP2P16562 243 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 ORM2P19652 201 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 IER3P46695 156 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 DLX1P56177 255 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 RANP62826 216 aaKnown RBP7.77□□□□□ -1.17
PTPRD-207ENST00000463477 EBI3Q14213 229 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 IQCJQ1A5X6 159 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 TMEM136Q6ZRR5 245 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 BAGE2Q86Y30 109 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 GRAMD2BQ96HH9 432 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 FMC1Q96HJ9 113 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 ATG101Q9BSB4 218 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 WNT10AQ9GZT5 417 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 MRPL27Q9P0M9 148 aaKnown RBP7.77□□□□□ -1.17
PTPRD-207ENST00000463477 DNHD1Q96M86 4753 aa7.77□□□□□ -1.17
PTPRD-207ENST00000463477 NPIPB5A8MRT5 1133 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 K7EIM0 57 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 PLGLAQ15195 96 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 MMDQ15546 238 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 C5orf64Q2M2E5 130 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 CT83Q5H943 113 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 OR10J3Q5JRS4 329 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TMEM68Q96MH6 324 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 NOL4LQ96MY1 436 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 GPR82Q96P67 336 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 MLST8Q9BVC4 326 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF492Q9P255 531 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TRAV30A0A087WSZ9 112 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 DNAJC9-AS1A6NH13 148 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 ZNF705GA8MUZ8 300 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 NPFFO15130 113 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TOMM40O96008 361 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 IGKV1-17P01599 117 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 SLC25A5P05141 298 aaKnown RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 HIST1H1EP10412 219 aaKnown RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 PSG1P11464 419 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TPPP2P59282 170 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 RAB4BP61018 213 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 UBE2G1P62253 170 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 PRB3Q04118 309 aaPredicted RBP7.76□□□□□ -1.17
PTPRD-207ENST00000463477 KLRD1Q13241 179 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 TMEM256Q8N2U0 113 aa7.76□□□□□ -1.17
PTPRD-207ENST00000463477 Q8N6K4 173 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms