RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 COX7A2P2O60397 106 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 ATP5SQ99766 215 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 NPCDR1Q9BY65 106 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 WDR61Q9GZS3 305 aaKnown RBP12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 U3KQK5 164 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 TENM3Q9P273 2699 aa12.3□□□□□ -0.44
HLA-DPA1-245ENST00000463066 COL7A1Q02388 2944 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RPL29P47914 159 aaKnown RBP12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 CMC4P56277 68 aaPredicted RBP12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 B2MP61769 119 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 IGFL4Q6B9Z1 124 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 LINC00305Q7Z4B0 112 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 OR2T35Q8NGX2 323 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 RCHY1Q96PM5 261 aa12.29□□□□□ -0.44
HLA-DPA1-245ENST00000463066 GALR1P47211 349 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 PXDC1Q5TGL8 231 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 C10orf113Q5VZT2 155 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 C20orf173Q96LM9 149 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 LINC00052Q96N35 136 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 DNAJC4Q9NNZ3 241 aa12.28□□□□□ -0.44
HLA-DPA1-245ENST00000463066 FXYD6-FXYD2A0A087WZ82 144 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 H3BTX0 84 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 MRPS12O15235 138 aaKnown RBP12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 MPDU1O75352 247 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 FGL1Q08830 312 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ACTL10Q5JWF8 245 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 Q6ZRG5 221 aa12.27□□□□□ -0.45
HLA-DPA1-245ENST00000463066 TRAV8-2A0A0B4J237 113 aa12.26□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ASB13Q8WXK3 278 aa12.26□□□□□ -0.45
HLA-DPA1-245ENST00000463066 AQP10Q96PS8 301 aa12.26□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SPATA25Q9BR10 227 aa12.26□□□□□ -0.45
HLA-DPA1-245ENST00000463066 STAB2Q8WWQ8 2551 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ELOA3CA0A087WX78 387 aaPredicted RBP12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 RNF222A6NCQ9 220 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 RPL7P18124 248 aaKnown RBP12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ATF4P18848 351 aaPredicted RBP12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 HLA-DMBP28068 263 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 GDF5OSQ5U4N7 250 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 RNF182Q8N6D2 247 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 OR1L4Q8NGR5 311 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 C16orf92Q96LL3 132 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 GPR82Q96P67 336 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ZMAT4Q9H898 229 aa12.25□□□□□ -0.45
HLA-DPA1-245ENST00000463066 F6UB75 175 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 IFNA5P01569 189 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 S100A7P31151 101 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 PSMB3P49720 205 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SNRPD3P62318 126 aaKnown RBP12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 NBEAL2Q6ZNJ1 2754 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 Q6ZNX1 250 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 TRPT1Q86TN4 253 aaKnown RBP12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ZNF709Q8N972 641 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 TNFSF18Q9UNG2 199 aa12.24□□□□□ -0.45
HLA-DPA1-245ENST00000463066 H3BQ15 152 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ISLRO14498 428 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 EIF3GO75821 320 aaKnown RBP eCLIP12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 ID1P41134 155 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 APOC4P55056 127 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 DEFB135Q30KP9 77 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 STHQ8IWL8 128 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SCGB1C1Q8TD33 95 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 PFDN5Q99471 154 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 OVOL2Q9BRP0 275 aa12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SEPSECSQ9HD40 501 aaKnown RBP12.23□□□□□ -0.45
HLA-DPA1-245ENST00000463066 AGRNO00468 2067 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 A0A087X0K7 114 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 KIR2DL5BA0A0G2JN68 375 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 KIR2DL5BA0A0G2JPC4 375 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 SLC17A3O00476 420 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 GIG44P09565 113 aaPredicted RBP12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 MEOX2P50222 304 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 FFAR4Q5NUL3 377 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 KIR2DL5AQ8N109 375 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 KIR2DL5BQ8NHK3 375 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 CSTL1Q9H114 145 aa12.22□□□□□ -0.45
HLA-DPA1-245ENST00000463066 C17orf112F2Z3M2 114 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 H3BMM0 161 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 IGKV3-20P01619 116 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 IGLC2P0DOY2 106 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 C4BPBP20851 252 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 FAM78BQ5VT40 261 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 S100A7AQ86SG5 101 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 HSD17B11Q8NBQ5 300 aa12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 PARD6GQ9BYG4 376 aaPredicted RBP12.21□□□□□ -0.45
HLA-DPA1-245ENST00000463066 hCG_2014768A0A024R1R8 64 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ARPC5O15511 151 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 CA1P00915 261 aaPredicted RBP12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF705DP0CH99 300 aaPredicted RBP12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 ZNF705BP0CI00 300 aaPredicted RBP12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 PYYP10082 97 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 INO80EQ8NBZ0 244 aaPredicted RBP12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 OR11H4Q8NGC9 324 aa12.2□□□□□ -0.46
HLA-DPA1-245ENST00000463066 FAM167A-AS1Q96KT0 104 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms