RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 CAMLGP49069 296 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 TMEM41BQ5BJD5 291 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 S100A7AQ86SG5 101 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 LINC00052Q96N35 136 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 RARRES2Q99969 163 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 ARV1Q9H2C2 271 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 OR5AC2Q9NZP5 309 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 STARD9Q9P2P6 4700 aa13.77□□□□□ -0.21
COL9A3-203ENST00000462700 UBE2L5PA0A1B0GUS4 154 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 E5RGE8 158 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 H0YIZ8 118 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 H3BMM0 161 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 RAB31Q13636 194 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 C16orf92Q96LL3 132 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
COL9A3-203ENST00000462700 RPL7P18124 248 aaKnown RBP13.75□□□□□ -0.21
COL9A3-203ENST00000462700 DEFB1P60022 68 aa13.75□□□□□ -0.21
COL9A3-203ENST00000462700 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
COL9A3-203ENST00000462700 GDF5OSQ5U4N7 250 aa13.75□□□□□ -0.21
COL9A3-203ENST00000462700 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
COL9A3-203ENST00000462700 PPP1R1CQ8WVI7 109 aa13.75□□□□□ -0.21
COL9A3-203ENST00000462700 COX7A2P2O60397 106 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 PRR20EP86478 221 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 PRR20CP86479 221 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 PRR20DP86480 221 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 PRR20BP86481 221 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 PRR20AP86496 221 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 EWSR1Q01844 656 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL9A3-203ENST00000462700 BAXQ07812 192 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 FOXI2Q6ZQN5 318 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 SLC25A31Q9H0C2 315 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 SAV1Q9H4B6 383 aaPredicted RBP13.74□□□□□ -0.21
COL9A3-203ENST00000462700 RNF24Q9Y225 148 aa13.74□□□□□ -0.21
COL9A3-203ENST00000462700 ATF4P18848 351 aaPredicted RBP13.73□□□□□ -0.21
COL9A3-203ENST00000462700 NHLH2Q02577 135 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 MIC13Q5XKP0 118 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 TMEM37Q8WXS4 190 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 C20orf173Q96LM9 149 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 ALG5Q9Y673 324 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 CSMD3Q7Z407 3707 aa13.73□□□□□ -0.21
COL9A3-203ENST00000462700 ELOA3CA0A087WX78 387 aaPredicted RBP13.72□□□□□ -0.21
COL9A3-203ENST00000462700 A0A087X0K7 114 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 FGF7P21781 194 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 RPL29P47914 159 aaKnown RBP13.72□□□□□ -0.21
COL9A3-203ENST00000462700 NUTF2P61970 127 aaKnown RBP13.72□□□□□ -0.21
COL9A3-203ENST00000462700 FGL1Q08830 312 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 OPCMLQ14982 345 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 Q6ZRG5 221 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 OR5C1Q8NGR4 320 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 CHAC2Q8WUX2 184 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 RPRMQ9NS64 109 aa13.72□□□□□ -0.21
COL9A3-203ENST00000462700 TRAV8-2A0A0B4J237 113 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 MRPS12O15235 138 aaKnown RBP13.71□□□□□ -0.21
COL9A3-203ENST00000462700 MPC2O95563 127 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 PET100P0DJ07 73 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 C10orf113Q5VZT2 155 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 CSNK1G2-AS1Q8NCQ2 148 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 RNF126Q9BV68 326 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 C11orf68Q9H3H3 251 aaKnown RBP13.71□□□□□ -0.21
COL9A3-203ENST00000462700 CLEC5AQ9NY25 188 aa13.71□□□□□ -0.21
COL9A3-203ENST00000462700 A0A0J9YX75 114 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 F6UB75 175 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 MPDU1O75352 247 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 B2MP61769 119 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 MORN5Q5VZ52 161 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 IGFL4Q6B9Z1 124 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 EBLN2Q6P2I7 272 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 OR1L4Q8NGR5 311 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 CLUHP3Q96NS8 147 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 C1QTNF4Q9BXJ3 329 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 SLC39A9Q9NUM3 307 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 RYR3Q15413 4870 aa13.7□□□□□ -0.22
COL9A3-203ENST00000462700 DYNC2H1Q8NCM8 4307 aaKnown RBP13.69□□□□□ -0.22
COL9A3-203ENST00000462700 ZNF705EA8MWA4 302 aaPredicted RBP13.69□□□□□ -0.22
COL9A3-203ENST00000462700 OR4B1Q8NGF8 309 aa13.69□□□□□ -0.22
COL9A3-203ENST00000462700 PFDN5Q99471 154 aa13.69□□□□□ -0.22
COL9A3-203ENST00000462700 NPCDR1Q9BY65 106 aa13.69□□□□□ -0.22
COL9A3-203ENST00000462700 XCL2Q9UBD3 114 aa13.69□□□□□ -0.22
COL9A3-203ENST00000462700 PXMP4Q9Y6I8 212 aa13.69□□□□□ -0.22
COL9A3-203ENST00000462700 AGRNO00468 2067 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 CXCL3P19876 107 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 CLINT1Q14677 625 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 FAM78BQ5VT40 261 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 BPIFA4PQ86YQ2 179 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 RNF182Q8N6D2 247 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 Q8NAQ8 132 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 THAP6Q8TBB0 222 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 X6R8D5 127 aa13.68□□□□□ -0.22
COL9A3-203ENST00000462700 CXCL2P19875 107 aa13.67□□□□□ -0.22
COL9A3-203ENST00000462700 PMS2P11Q13670 270 aa13.67□□□□□ -0.22
COL9A3-203ENST00000462700 ZNF709Q8N972 641 aa13.67□□□□□ -0.22
COL9A3-203ENST00000462700 MBD2Q9UBB5 411 aa13.67□□□□□ -0.22
COL9A3-203ENST00000462700 SACSQ9NZJ4 4579 aa13.66□□□□□ -0.22
COL9A3-203ENST00000462700 IGHV4-28A0A0C4DH34 117 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms