RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 SMCO3A2RU48 225 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 CNN1P51911 297 aaKnown RBP10.92□□□□□ -0.66
SKA3-204ENST00000462482 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 Q6ZR54 194 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 C20orf173Q96LM9 149 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 SOSTQ9BQB4 213 aa10.92□□□□□ -0.66
SKA3-204ENST00000462482 SLIRPQ9GZT3 109 aaKnown RBP10.92□□□□□ -0.66
SKA3-204ENST00000462482 SFT2D2O95562 160 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 IL5P05113 134 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 HOXB5P09067 269 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 RPL7P18124 248 aaKnown RBP10.91□□□□□ -0.66
SKA3-204ENST00000462482 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 ZNF738Q8NE65 137 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 LRRC20Q8TCA0 184 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 DEDD2Q8WXF8 326 aa10.91□□□□□ -0.66
SKA3-204ENST00000462482 A8MTW9 85 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 ZNF705GA8MUZ8 300 aaPredicted RBP10.9□□□□□ -0.66
SKA3-204ENST00000462482 M0R2Z0 102 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 DEFB130BP0DP73 79 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 DEFB130AP0DP74 79 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 GATA2P23769 480 aaPredicted RBP10.9□□□□□ -0.66
SKA3-204ENST00000462482 S100A5P33763 92 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 RHOBP62745 196 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 AMTNQ6UX39 209 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 ACOT7LQ6ZUV0 252 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 OR11H7Q8NGC8 314 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 RNF24Q9Y225 148 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 HIGD1AQ9Y241 93 aa10.9□□□□□ -0.66
SKA3-204ENST00000462482 H3BP45 60 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 HYPMO75409 117 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 OR5G3P0C626 314 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 PPP1R1AQ13522 171 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 CYP2G1PQ6ZSU1 146 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 TMEM144Q7Z5S9 345 aa10.89□□□□□ -0.67
SKA3-204ENST00000462482 SLC25A39Q9BZJ4 359 aaPredicted RBP10.89□□□□□ -0.67
SKA3-204ENST00000462482 PRSS46E5RG02 174 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 F5H768 121 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 H3BMQ9 156 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 BOLA2-SMG1P6H3BVE0 249 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 TSPOP30536 169 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 INPP1P49441 399 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 SELENOTP62341 195 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 HIST1H1AQ02539 215 aaPredicted RBP10.88□□□□□ -0.67
SKA3-204ENST00000462482 IGFL4Q6B9Z1 124 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 TMEM256Q8N2U0 113 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 RNF182Q8N6D2 247 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 TRIM63Q969Q1 353 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 LINC01587Q99440 93 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 SHANK2-AS3Q9BTD1 123 aa10.88□□□□□ -0.67
SKA3-204ENST00000462482 H3BRN7 92 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 NUDT3O95989 172 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 ATP5G1P05496 136 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 ATP5G3P48201 142 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 UBE2MP61081 183 aaKnown RBP10.87□□□□□ -0.67
SKA3-204ENST00000462482 TMEM182Q6ZP80 229 aaPredicted RBP10.87□□□□□ -0.67
SKA3-204ENST00000462482 BAP18Q8IXM2 172 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 PSENENQ9NZ42 101 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 PCLOQ9Y6V0 5065 aa10.87□□□□□ -0.67
SKA3-204ENST00000462482 TRAV8-2A0A0B4J237 113 aa10.86□□□□□ -0.67
SKA3-204ENST00000462482 LINC00869P0C866 280 aa10.86□□□□□ -0.67
SKA3-204ENST00000462482 HTN1P15515 57 aa10.86□□□□□ -0.67
SKA3-204ENST00000462482 ANXA7P20073 488 aaKnown RBP10.86□□□□□ -0.67
SKA3-204ENST00000462482 CCL18P55774 89 aa10.86□□□□□ -0.67
SKA3-204ENST00000462482 MGAT4CQ9UBM8 478 aa10.86□□□□□ -0.67
SKA3-204ENST00000462482 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 CCDC160A6NGH7 325 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 CBY3A6NI87 242 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
SKA3-204ENST00000462482 TAS2R60P59551 318 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 POLR2GP62487 172 aaKnown RBP eCLIP10.85□□□□□ -0.67
SKA3-204ENST00000462482 CLINT1Q14677 625 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 PSG3Q16557 428 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 OR8A1Q8NGG7 326 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 C16orf74Q96GX8 76 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 C17orf77Q96MU5 243 aa10.85□□□□□ -0.67
SKA3-204ENST00000462482 SSSCA1O60232 199 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 PRM2P04554 102 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 CXCL3P19876 107 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 DLK1P80370 383 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 ID3Q02535 119 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 ZNF575Q86XF7 245 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 OR10P1Q8NGE3 313 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 ARL6Q9H0F7 186 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 NPVFQ9HCQ7 196 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
SKA3-204ENST00000462482 V9GYH0 126 aa10.84□□□□□ -0.67
SKA3-204ENST00000462482 FAT2Q9NYQ8 4349 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 A0A087X0K7 114 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 NBDYA0A0U1RRE5 68 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 C9orf170A2RU37 121 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 ADAP1O75689 374 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 PLP1P60201 277 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 RRAS2P62070 204 aaPredicted RBP10.83□□□□□ -0.68
SKA3-204ENST00000462482 SPANXN2Q5MJ10 180 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 PXDC1Q5TGL8 231 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 TEPPQ6URK8 271 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 ZNF493Q6ZR52 646 aa10.83□□□□□ -0.68
SKA3-204ENST00000462482 OR10J6PQ8NGY7 276 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms