RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 DLK1P80370 383 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 ZNF767PQ75MW2 155 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 SHANK2-AS3Q9BTD1 123 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 SCRT1Q9BWW7 348 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 SLC25A39Q9BZJ4 359 aaPredicted RBP13.6□□□□□ -0.23
VARS-220ENST00000461874 NDUFA13Q9P0J0 144 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 GSKIPQ9P0R6 139 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 DOK5Q9P104 306 aa13.6□□□□□ -0.23
VARS-220ENST00000461874 DNAH6Q9C0G6 4158 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 IGHV4-4A0A075B6R2 117 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 IGHV3OR16-12A0A075B7B8 117 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 FNDC10F2Z333 226 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 H3BRN7 92 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 TSC22D2O75157 780 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 HYPMO75409 117 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 RRAS2P62070 204 aaPredicted RBP13.59□□□□□ -0.23
VARS-220ENST00000461874 SELENOTP62341 195 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 RNF126Q9BV68 326 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 C20orf85Q9H1P6 137 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 NPVFQ9HCQ7 196 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 HIGD1AQ9Y241 93 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 RCL1Q9Y2P8 373 aaKnown RBP13.59□□□□□ -0.23
VARS-220ENST00000461874 DNAH10Q8IVF4 4471 aa13.59□□□□□ -0.23
VARS-220ENST00000461874 DEFB131BA0A096LNP1 70 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 TMEM189A5PLL7 270 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 A8MTW9 85 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 LYRM1O43325 122 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 RAP2BP61225 183 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 OR10P1Q8NGE3 313 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 RFNGQ9Y644 331 aa13.58□□□□□ -0.24
VARS-220ENST00000461874 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 K7EPK0 472 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 MBPP02686 304 aaPredicted RBP13.57□□□□□ -0.24
VARS-220ENST00000461874 LINC00869P0C866 280 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 SPART-AS1P0CW21 52 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 EMP1P54849 157 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 IGFL4Q6B9Z1 124 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 C1orf158Q8N1D5 194 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 MGAT4CQ9UBM8 478 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 GOLT1BQ9Y3E0 138 aa13.57□□□□□ -0.24
VARS-220ENST00000461874 C7orf66A4D0T2 115 aa13.56□□□□□ -0.24
VARS-220ENST00000461874 TCRBP04435 133 aa13.56□□□□□ -0.24
VARS-220ENST00000461874 OR5G3P0C626 314 aa13.56□□□□□ -0.24
VARS-220ENST00000461874 RPL7P18124 248 aaKnown RBP13.56□□□□□ -0.24
VARS-220ENST00000461874 TEPPQ6URK8 271 aa13.56□□□□□ -0.24
VARS-220ENST00000461874 AMTNQ6UX39 209 aa13.56□□□□□ -0.24
VARS-220ENST00000461874 AMBPP02760 352 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 FGL1Q08830 312 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 ARL16Q0P5N6 197 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 RNF182Q8N6D2 247 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 UHRF2Q96PU4 802 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 GGACTQ9BVM4 153 aa13.55□□□□□ -0.24
VARS-220ENST00000461874 TRAV6A0A075B6T7 132 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 CCSO14618 274 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 DUSP14O95147 198 aaKnown RBP13.54□□□□□ -0.24
VARS-220ENST00000461874 CNN1P51911 297 aaKnown RBP13.54□□□□□ -0.24
VARS-220ENST00000461874 SLC38A11Q08AI6 406 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 PATE2Q6UY27 113 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 S100A7AQ86SG5 101 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 ARL6Q9H0F7 186 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 DKK2Q9UBU2 259 aa13.54□□□□□ -0.24
VARS-220ENST00000461874 HBE1P02100 147 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 ZNF846Q147U1 533 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 PXDC1Q5TGL8 231 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 OR11H7Q8NGC8 314 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 ZNF431Q8TF32 576 aaPredicted RBP13.53□□□□□ -0.24
VARS-220ENST00000461874 IGF2BP2-AS1Q96M15 143 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 NUDT15Q9NV35 164 aa13.53□□□□□ -0.24
VARS-220ENST00000461874 A0A087X0K7 114 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 TEX48A0A1B0GUV7 120 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 L7N2F9 121 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 GOSR2O14653 212 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 VAMP2P63027 116 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 ZNF546Q86UE3 836 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 SEC22CQ9BRL7 303 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 NDUFAF3Q9BU61 184 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 CCDC32Q9BV29 185 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 ARV1Q9H2C2 271 aa13.52□□□□□ -0.25
VARS-220ENST00000461874 LOC102723971A0A1B0GUV8 181 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 FAM25EA8MYX2 175 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 AGPAT2O15120 278 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 MRPS12O15235 138 aaKnown RBP13.51□□□□□ -0.25
VARS-220ENST00000461874 CXCL3P19876 107 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 RRN3P1Q2M238 152 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 ZNF738Q8NE65 137 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 NIPSNAP3BQ9BS92 247 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 RNF24Q9Y225 148 aa13.51□□□□□ -0.25
VARS-220ENST00000461874 LSM5Q9Y4Y9 91 aaKnown RBP13.51□□□□□ -0.25
VARS-220ENST00000461874 C5orf51A6NDU8 294 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 M0R2Z0 102 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 CRXO43186 299 aaPredicted RBP13.5□□□□□ -0.25
VARS-220ENST00000461874 SPINK13Q1W4C9 94 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 C12orf45Q8N5I9 185 aaPredicted RBP13.5□□□□□ -0.25
VARS-220ENST00000461874 MGST2Q99735 147 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 TMEM208Q9BTX3 173 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 PLA2G2EQ9NZK7 142 aa13.5□□□□□ -0.25
VARS-220ENST00000461874 YTHDF2Q9Y5A9 579 aaKnown RBP13.5□□□□□ -0.25
VARS-220ENST00000461874 H2AFB2P0C5Z0 115 aa13.49□□□□□ -0.25
VARS-220ENST00000461874 BCAP31P51572 246 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms