RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SPANXN5Q5MJ07 72 aa12.69□□□□□ -0.38
SSB-206ENST00000461708 ACOT7LQ6ZUV0 252 aa12.69□□□□□ -0.38
SSB-206ENST00000461708 YTHDF2Q9Y5A9 579 aaKnown RBP12.69□□□□□ -0.38
SSB-206ENST00000461708 B2MP61769 119 aa12.68□□□□□ -0.38
SSB-206ENST00000461708 TMEM182Q6ZP80 229 aaPredicted RBP12.68□□□□□ -0.38
SSB-206ENST00000461708 CCDC190Q86UF4 302 aa12.68□□□□□ -0.38
SSB-206ENST00000461708 PRSS29PA6NIE9 313 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 GATA2P23769 480 aaPredicted RBP12.67□□□□□ -0.38
SSB-206ENST00000461708 TSPOP30536 169 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 CNN1P51911 297 aaKnown RBP12.67□□□□□ -0.38
SSB-206ENST00000461708 PLP1P60201 277 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 SELENOTP62341 195 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 Q6ZR54 194 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 SHANK2-AS3Q9BTD1 123 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
SSB-206ENST00000461708 TRAV8-2A0A0B4J237 113 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 C9orf170A2RU37 121 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 H3BRN7 92 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
SSB-206ENST00000461708 FAM3BP58499 235 aaPredicted RBP12.66□□□□□ -0.38
SSB-206ENST00000461708 DAD1P61803 113 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 GSG1LQ6UXU4 331 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 CYP2G1PQ6ZSU1 146 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 S100A7AQ86SG5 101 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 UBE2DNLQ8IWF7 75 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 OR11H7Q8NGC8 314 aa12.66□□□□□ -0.38
SSB-206ENST00000461708 SLC25A39Q9BZJ4 359 aaPredicted RBP12.66□□□□□ -0.38
SSB-206ENST00000461708 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 NACAE9PAV3 2078 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 NAP1L6A6NFF2 107 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 LYRM9A8MSI8 78 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 H3BP45 60 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 M0R2N4 97 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
SSB-206ENST00000461708 INSP01308 110 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 IL5P05113 134 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 MED14OSP0DP75 135 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 RAP2BP61225 183 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 PLA2G2EQ9NZK7 142 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 RNF24Q9Y225 148 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 HIGD1AQ9Y241 93 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 PKD1P98161 4303 aa12.65□□□□□ -0.38
SSB-206ENST00000461708 MUC4Q99102 2169 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 PMS2P5A8MQ11 134 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 K7EPK0 472 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 HYPMO75409 117 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 NDUFB6O95139 128 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
SSB-206ENST00000461708 SPANXN2Q5MJ10 180 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 TMEM88Q6PEY1 159 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 PSENENQ9NZ42 101 aa12.64□□□□□ -0.39
SSB-206ENST00000461708 A0A087X0K7 114 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 ADAP1O75689 374 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 HTN3P15516 51 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 DLK1P80370 383 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 SPINK13Q1W4C9 94 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 SOHLH1Q5JUK2 328 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 SRRQ9GZT4 340 aa12.63□□□□□ -0.39
SSB-206ENST00000461708 SMCO3A2RU48 225 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
SSB-206ENST00000461708 M0R2Z0 102 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 LINC00869P0C866 280 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 TAS2R30P59541 319 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 TMEM256Q8N2U0 113 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 RNF182Q8N6D2 247 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 NPVFQ9HCQ7 196 aa12.62□□□□□ -0.39
SSB-206ENST00000461708 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 OR4E1P0C645 316 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 CXCL3P19876 107 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 FGL1Q08830 312 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 IGFL4Q6B9Z1 124 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 ZNF738Q8NE65 137 aa12.61□□□□□ -0.39
SSB-206ENST00000461708 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 IGLV2-18A0A075B6J9 118 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 ZNF705GA8MUZ8 300 aaPredicted RBP12.6□□□□□ -0.39
SSB-206ENST00000461708 SSSCA1O60232 199 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 TSC22D2O75157 780 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 OR5G3P0C626 314 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 PSG3Q16557 428 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 C4orf46Q504U0 113 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 OR8A1Q8NGG7 326 aa12.6□□□□□ -0.39
SSB-206ENST00000461708 RBM38Q9H0Z9 239 aaKnown RBP12.6□□□□□ -0.39
SSB-206ENST00000461708 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 CCDC160A6NGH7 325 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 CXCL2P19875 107 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 INPP1P49441 399 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 CNPY1Q3B7I2 92 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 TRIQKQ629K1 86 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 TEPPQ6URK8 271 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 OR10P1Q8NGE3 313 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 UHRF2Q96PU4 802 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 MGAT4CQ9UBM8 478 aa12.59□□□□□ -0.39
SSB-206ENST00000461708 MRPS12O15235 138 aaKnown RBP12.58□□□□□ -0.4
SSB-206ENST00000461708 METTL15P1P0C7V9 234 aa12.58□□□□□ -0.4
SSB-206ENST00000461708 TAS2R60P59551 318 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms