RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IGSF23A1L1A6 192 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 NUPR2A6NF83 97 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 RLN2P04090 185 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 RPL7P18124 248 aaKnown RBP11.24□□□□□ -0.61
VARS-219ENST00000461328 SULT1A1P50225 295 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 PLP1P60201 277 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 NUTF2P61970 127 aaKnown RBP11.24□□□□□ -0.61
VARS-219ENST00000461328 TMEM252Q8N6L7 170 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 MGST2Q99735 147 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 STARD9Q9P2P6 4700 aa11.24□□□□□ -0.61
VARS-219ENST00000461328 H3BMM0 161 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 SOCS3O14543 225 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 COX7A2P2O60397 106 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 S100A11P31949 105 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 CAMLGP49069 296 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 BAXQ07812 192 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 IL15RAQ13261 267 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 PXDC1Q5TGL8 231 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 FOXI2Q6ZQN5 318 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 NMES1Q9C002 83 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 CLEC5AQ9NY25 188 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 RNF24Q9Y225 148 aa11.23□□□□□ -0.61
VARS-219ENST00000461328 DEFB1P60022 68 aa11.22□□□□□ -0.61
VARS-219ENST00000461328 CYCSP99999 105 aaKnown RBP11.22□□□□□ -0.61
VARS-219ENST00000461328 EBLN2Q6P2I7 272 aa11.22□□□□□ -0.61
VARS-219ENST00000461328 OR4B1Q8NGF8 309 aa11.22□□□□□ -0.61
VARS-219ENST00000461328 C1QTNF4Q9BXJ3 329 aa11.22□□□□□ -0.61
VARS-219ENST00000461328 RPRMQ9NS64 109 aa11.22□□□□□ -0.61
VARS-219ENST00000461328 E5RGE8 158 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 GIG44P09565 113 aaPredicted RBP11.21□□□□□ -0.61
VARS-219ENST00000461328 FGF7P21781 194 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 GDF5OSQ5U4N7 250 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 CEMP1Q6PRD7 247 aaPredicted RBP11.21□□□□□ -0.61
VARS-219ENST00000461328 Q6ZRG5 221 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 LINC00305Q7Z4B0 112 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 LRRC20Q8TCA0 184 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 SLC25A31Q9H0C2 315 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 C11orf68Q9H3H3 251 aaKnown RBP11.21□□□□□ -0.61
VARS-219ENST00000461328 SAV1Q9H4B6 383 aaPredicted RBP11.21□□□□□ -0.61
VARS-219ENST00000461328 XCL2Q9UBD3 114 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 WDR83OSQ9Y284 106 aa11.21□□□□□ -0.61
VARS-219ENST00000461328 SACSQ9NZJ4 4579 aa11.21□□□□□ -0.62
VARS-219ENST00000461328 DEFB4AO15263 64 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 FXYD7P58549 80 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 ATP6V1FQ16864 119 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 C20orf173Q96LM9 149 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 OR5AC2Q9NZP5 309 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 KLK5Q9Y337 293 aaPredicted RBP11.2□□□□□ -0.62
VARS-219ENST00000461328 AGRNO00468 2067 aa11.2□□□□□ -0.62
VARS-219ENST00000461328 ELOA3CA0A087WX78 387 aaPredicted RBP11.19□□□□□ -0.62
VARS-219ENST00000461328 F6UB75 175 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 PET100P0DJ07 73 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 H2BFSP57053 126 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 VWC2Q2TAL6 325 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 SPATA31B1PQ5VZV4 182 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 PATE2Q6UY27 113 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 ZNF738Q8NE65 137 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 OR1L4Q8NGR5 311 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 PPP1R1CQ8WVI7 109 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 RYR2Q92736 4967 aa11.19□□□□□ -0.62
VARS-219ENST00000461328 PTTG1O95997 202 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 MIFP14174 115 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 B2MP61769 119 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 CLINT1Q14677 625 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 FAM78BQ5VT40 261 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 IGFL4Q6B9Z1 124 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 RNF182Q8N6D2 247 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 OR5C1Q8NGR4 320 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 C11orf45Q8TAV5 145 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 PHLDA1Q8WV24 401 aaPredicted RBP11.18□□□□□ -0.62
VARS-219ENST00000461328 PFDN5Q99471 154 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 MFFQ9GZY8 342 aa11.18□□□□□ -0.62
VARS-219ENST00000461328 A0A087X0K7 114 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 IGHV4-28A0A0C4DH34 117 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 A0A0J9YX75 114 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 NANOS2P60321 138 aaKnown RBP11.17□□□□□ -0.62
VARS-219ENST00000461328 NHLH2Q02577 135 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 OPCMLQ14982 345 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 BPIFA4PQ86YQ2 179 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 THAP6Q8TBB0 222 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 LINC00476Q8WZB0 136 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 C17orf77Q96MU5 243 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 DNAJC4Q9NNZ3 241 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 PXMP4Q9Y6I8 212 aa11.17□□□□□ -0.62
VARS-219ENST00000461328 IGHV3OR16-12A0A075B7B8 117 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 H0YIZ8 118 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 RPL29P47914 159 aaKnown RBP11.16□□□□□ -0.62
VARS-219ENST00000461328 PRR20EP86478 221 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 PRR20CP86479 221 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 PRR20DP86480 221 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 PRR20BP86481 221 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 PRR20AP86496 221 aa11.16□□□□□ -0.62
VARS-219ENST00000461328 PSG9Q00887 426 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms