RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 PRM2P04554 102 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 HOXB5P09067 269 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 ORM2P19652 201 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 AP3S2P59780 193 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 PPP1R1AQ13522 171 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 PYDC2Q56P42 97 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 SPANXN5Q5MJ07 72 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 BPIFCQ8NFQ6 507 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 OR11H7Q8NGC8 314 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 OR1B1Q8NGR6 318 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 GPR82Q96P67 336 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 SLC25A21Q9BQT8 299 aaPredicted RBP10.39□□□□□ -0.75
SMPD4-216ENST00000461187 TMEM208Q9BTX3 173 aa10.39□□□□□ -0.75
SMPD4-216ENST00000461187 TRAV8-2A0A0B4J237 113 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 H3BP45 60 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 M0R2Z0 102 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 CRXO43186 299 aaPredicted RBP10.38□□□□□ -0.75
SMPD4-216ENST00000461187 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
SMPD4-216ENST00000461187 AKR1C1Q04828 323 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 IGFL4Q6B9Z1 124 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 RNF182Q8N6D2 247 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 TMEM147Q9BVK8 224 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 V9GYH0 126 aa10.38□□□□□ -0.75
SMPD4-216ENST00000461187 ZNF705GA8MUZ8 300 aaPredicted RBP10.37□□□□□ -0.75
SMPD4-216ENST00000461187 H3BRN7 92 aa10.37□□□□□ -0.75
SMPD4-216ENST00000461187 NOL3O60936 208 aaKnown RBP10.37□□□□□ -0.75
SMPD4-216ENST00000461187 DUSP14O95147 198 aaKnown RBP10.37□□□□□ -0.75
SMPD4-216ENST00000461187 ACOT7LQ6ZUV0 252 aa10.37□□□□□ -0.75
SMPD4-216ENST00000461187 TMEM144Q7Z5S9 345 aa10.37□□□□□ -0.75
SMPD4-216ENST00000461187 STRAPQ9Y3F4 350 aaKnown RBP10.37□□□□□ -0.75
SMPD4-216ENST00000461187 INSP01308 110 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 S100A7P31151 101 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 CYP2G1PQ6ZSU1 146 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 BAP18Q8IXM2 172 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 C15orf53Q8NAA6 179 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 DEDD2Q8WXF8 326 aa10.36□□□□□ -0.75
SMPD4-216ENST00000461187 SLC25A39Q9BZJ4 359 aaPredicted RBP10.36□□□□□ -0.75
SMPD4-216ENST00000461187 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 LYRM9A8MSI8 78 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 B2MP61769 119 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 ID3Q02535 119 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 FGL1Q08830 312 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 SOHLH1Q5JUK2 328 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 C1orf134Q5TEV5 83 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 SHANK2-AS3Q9BTD1 123 aa10.35□□□□□ -0.75
SMPD4-216ENST00000461187 TRAV12-2A0A075B6T6 113 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 PMS2P5A8MQ11 134 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 ADAP1O75689 374 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 IL5P05113 134 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 AZU1P20160 251 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 TSPOP30536 169 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 FAM3BP58499 235 aaPredicted RBP10.34□□□□□ -0.75
SMPD4-216ENST00000461187 PLP1P60201 277 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 UBE2MP61081 183 aaKnown RBP10.34□□□□□ -0.75
SMPD4-216ENST00000461187 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
SMPD4-216ENST00000461187 ZNF575Q86XF7 245 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
SMPD4-216ENST00000461187 C9orf170A2RU37 121 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 SMCO3A2RU48 225 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 HYPMO75409 117 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 DEFB130BP0DP73 79 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 DEFB130AP0DP74 79 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 RPL7P18124 248 aaKnown RBP10.33□□□□□ -0.76
SMPD4-216ENST00000461187 RAP2BP61225 183 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 FCN2Q15485 313 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 CCDC190Q86UF4 302 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 UHRF2Q96PU4 802 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 PSENENQ9NZ42 101 aa10.33□□□□□ -0.76
SMPD4-216ENST00000461187 A0A087X0K7 114 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 CCNKO75909 580 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 LINC00869P0C866 280 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 CXCL3P19876 107 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 SELENOTP62341 195 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 OR8A1Q8NGG7 326 aa10.32□□□□□ -0.76
SMPD4-216ENST00000461187 SSSCA1O60232 199 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 OR5G3P0C626 314 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 S100A5P33763 92 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 RHOBP62745 196 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 DLK1P80370 383 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
SMPD4-216ENST00000461187 PSG3Q16557 428 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 PATE2Q6UY27 113 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 SMIM8Q96KF7 97 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 ATG101Q9BSB4 218 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 HSPG2P98160 4391 aa10.31□□□□□ -0.76
SMPD4-216ENST00000461187 ABCA13Q86UQ4 5058 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 F5H768 121 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 MRPS12O15235 138 aaKnown RBP10.3□□□□□ -0.76
SMPD4-216ENST00000461187 PRB4P10163 310 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-216ENST00000461187 RRAS2P62070 204 aaPredicted RBP10.3□□□□□ -0.76
SMPD4-216ENST00000461187 TMEM14EPQ6UXP3 125 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 LINC01587Q99440 93 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 ARL6Q9H0F7 186 aa10.3□□□□□ -0.76
SMPD4-216ENST00000461187 NPVFQ9HCQ7 196 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms