RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
TOP3A-202ENST00000461127 CORTO00230 105 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 CXCL2P19875 107 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 NHLH2Q02577 135 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 SLC38A11Q08AI6 406 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 ZNF345Q14585 488 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 C12orf74Q32Q52 190 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 LILRB2Q8N423 598 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 PINX1Q96BK5 328 aaKnown RBP12.4□□□□□ -0.42
TOP3A-202ENST00000461127 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 X6R8D5 127 aa12.4□□□□□ -0.42
TOP3A-202ENST00000461127 IGHV3OR16-13A0A075B7E8 117 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 IGHV3-74A0A0B4J1X5 117 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 RPS10-NUDT3A0A1W2PQS6 291 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 F8W735 103 aaPredicted RBP12.39□□□□□ -0.43
TOP3A-202ENST00000461127 CTSGP08311 255 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 C4BPBP20851 252 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 S100A11P31949 105 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 OPRK1P41145 380 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 RPL11P62913 178 aaKnown RBP12.39□□□□□ -0.43
TOP3A-202ENST00000461127 ETFRF1Q6IPR1 90 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 ZNF767PQ75MW2 155 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 Q8N1X5 172 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 KCNRGQ8N5I3 272 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 OR5C1Q8NGR4 320 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 GINS3Q9BRX5 216 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 ARL6Q9H0F7 186 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 MS4A6AQ9H2W1 248 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 CELA1Q9UNI1 258 aa12.39□□□□□ -0.43
TOP3A-202ENST00000461127 TRAV2A0A0B4J234 112 aa12.38□□□□□ -0.43
TOP3A-202ENST00000461127 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
TOP3A-202ENST00000461127 GIG44P09565 113 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-202ENST00000461127 CLINT1Q14677 625 aa12.38□□□□□ -0.43
TOP3A-202ENST00000461127 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
TOP3A-202ENST00000461127 LGALSLQ3ZCW2 172 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-202ENST00000461127 TMUB2Q71RG4 321 aa12.38□□□□□ -0.43
TOP3A-202ENST00000461127 SMCO3A2RU48 225 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 PMS2P5A8MQ11 134 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 K7EIM0 57 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 DLK1P80370 383 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 ARL16Q0P5N6 197 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 TRPT1Q86TN4 253 aaKnown RBP12.37□□□□□ -0.43
TOP3A-202ENST00000461127 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 SLC35E1Q96K37 410 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 ARPC5LQ9BPX5 153 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 AGRNO00468 2067 aa12.37□□□□□ -0.43
TOP3A-202ENST00000461127 TAAR5O14804 337 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 BCL2L11O43521 198 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 MT-CO2P00403 227 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 GPX4P36969 197 aaPredicted RBP12.36□□□□□ -0.43
TOP3A-202ENST00000461127 ATP5SQ99766 215 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 TMEM147Q9BVK8 224 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 GGACTQ9BVM4 153 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 SCRT2Q9NQ03 307 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 UQCC1Q9NVA1 299 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 RABAC1Q9UI14 185 aa12.36□□□□□ -0.43
TOP3A-202ENST00000461127 PRSS46E5RG02 174 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 IFNA5P01569 189 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 MFAP4P55083 255 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 AKR1C1Q04828 323 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 RNF212Q495C1 297 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 ST8SIA2Q92186 375 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 FAM210BQ96KR6 192 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 TXN2Q99757 166 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 SCRT1Q9BWW7 348 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
TOP3A-202ENST00000461127 BORCS7-ASMTA0A0B4J1R7 106 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 I3L2K1 104 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 ZNF266Q14584 549 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 OPCMLQ14982 345 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 FAM24BQ8N5W8 94 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 ACY3Q96HD9 319 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
TOP3A-202ENST00000461127 VSIRQ9H7M9 311 aa12.34□□□□□ -0.43
TOP3A-202ENST00000461127 DMBT1Q9UGM3 2413 aaPredicted RBP12.33□□□□□ -0.43
TOP3A-202ENST00000461127 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 IGHV3-48P01763 117 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 MLANAQ16655 118 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 SCGB1C1Q8TD33 95 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 ZNF471Q9BX82 626 aaPredicted RBP12.33□□□□□ -0.44
TOP3A-202ENST00000461127 WFDC1Q9HC57 220 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 HERC1Q15751 4861 aa12.33□□□□□ -0.44
TOP3A-202ENST00000461127 FNDC10F2Z333 226 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 RND2P52198 227 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 GAMTQ14353 236 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 GRAMD2BQ96HH9 432 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 NPVFQ9HCQ7 196 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
TOP3A-202ENST00000461127 IGHV3-66A0A0C4DH42 116 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 GNG7O60262 68 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 SCGB2A1O75556 95 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 FGF7P21781 194 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 NPBWR1P48145 328 aa12.31□□□□□ -0.44
TOP3A-202ENST00000461127 EIF5AP63241 154 aaKnown RBP12.31□□□□□ -0.44
TOP3A-202ENST00000461127 TNP2Q05952 138 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms