RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	NUP62	P37198	522 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	CAMLG	P49069	296 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	AKR1C1	Q04828	323 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	RAB31	Q13636	194 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF266	Q14584	549 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	USF2	Q15853	346 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	DEFB114	Q30KQ6	69 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	KHDC1L	Q5JSQ8	128 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	C1orf194	Q5T5A4	169 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	PATE2	Q6UY27	113 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	C9orf62	Q8N4C0	152 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR2K2	Q8NGT1	345 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR2G3	Q8NGZ4	309 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	STOML3	Q8TAV4	291 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	GATAD1	Q8WUU5	269 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMEM37	Q8WXS4	190 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	RNF125	Q96EQ8	232 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	GINS3	Q9BRX5	216 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	PSMG3	Q9BT73	122 aa	Predicted RBP	4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	NPCDR1	Q9BY65	106 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	TECR	Q9NZ01	308 aa	Known RBP	4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	PEMT	Q9UBM1	199 aa		4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	PAIP2B	Q9ULR5	123 aa	Known RBP	4.24	□□□□□ -1.73
PTPN12-209	ENST00000460731	TRAV25	A0A0B4J276	109 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	IGHV3-35	A0A0C4DH35	117 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	IGHV7-4-1	A0A0J9YVY3	117 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	CHEK1	O14757	476 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	MRPS12	O15235	138 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	HYPM	O75409	117 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	IFNA5	P01569	189 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	SPP1	P10451	314 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	NPPC	P23582	126 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	GATA2	P23769	480 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	AP2S1	P53680	142 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	SERF2	P84101	59 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	CLINT1	Q14677	625 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	RPL7L1	Q6DKI1	246 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	C16orf54	Q6UWD8	224 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	TMUB2	Q71RG4	321 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	BPIFC	Q8NFQ6	507 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	GLMP	Q8WWB7	406 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	PPP1R14B	Q96C90	147 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	C17orf77	Q96MU5	243 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	SHANK2-AS3	Q9BTD1	123 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	ELOVL1	Q9BW60	279 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	GPR61	Q9BZJ8	451 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	SEPSECS	Q9HD40	501 aa	Known RBP	4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	DNAJC4	Q9NNZ3	241 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	SLC39A9	Q9NUM3	307 aa		4.23	□□□□□ -1.73
PTPN12-209	ENST00000460731	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	TRAV2	A0A0B4J234	112 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	UBE2L5P	A0A1B0GUS4	154 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731		A0A1W2PS18	150 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF320	A2RRD8	509 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF785	A8K8V0	405 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	SEC14L6	B5MCN3	397 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	TSPAN4	O14817	238 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	BCL2L11	O43521	198 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	APOH	P02749	345 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	IL4	P05112	153 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	OR5G3	P0C626	314 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	SEC11B	P0C7V7	166 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	FGF7	P21781	194 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ATP6V0C	P27449	155 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	EIF2B2	P49770	351 aa	Known RBP	4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	B2M	P61769	119 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZFP69	Q49AA0	526 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	C9orf66	Q5T8R8	295 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	MIC13	Q5XKP0	118 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	FAM167A-AS1	Q96KT0	104 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	METTL26	Q96S19	204 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ARPC5L	Q9BPX5	153 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	FAM110A	Q9BQ89	295 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	RHPN1-AS1	Q9BWJ2	59 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	SMIM3	Q9BZL3	60 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	KCNIP2	Q9NS61	270 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	MLX	Q9UH92	298 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	RNF24	Q9Y225	148 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	PXMP4	Q9Y6I8	212 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	MEGF8	Q7Z7M0	2845 aa		4.22	□□□□□ -1.73
PTPN12-209	ENST00000460731	SMCO3	A2RU48	225 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	ZNF98	A6NK75	572 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	C17orf112	F2Z3M2	114 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731		H3BRN7	92 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	IGLL1	P15814	213 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	M6PR	P20645	277 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	EDN2	P20800	178 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	S100A7	P31151	101 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	BMI1	P35226	326 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	EIF5A	P63241	154 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731		Q6ZRG5	221 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	S100A7A	Q86SG5	101 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	SLC51B	Q86UW2	128 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	BAP18	Q8IXM2	172 aa		4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	RPP25L	Q8N5L8	163 aa	Known RBP	4.21	□□□□□ -1.74
PTPN12-209	ENST00000460731	ZNF709	Q8N972	641 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms