RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 GCSAMLQ5JQS6 135 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 NARS2Q96I59 477 aaKnown RBP11.72□□□□□ -0.53
SDF4-204ENST00000459994 RCHY1Q96PM5 261 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 SHANK2-AS3Q9BTD1 123 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 SIGLEC8Q9NYZ4 499 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 RNF24Q9Y225 148 aa11.72□□□□□ -0.53
SDF4-204ENST00000459994 H3BRN7 92 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 CBLN1P23435 193 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 BMI1P35226 326 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 TMEM41BQ5BJD5 291 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 SLC25A39Q9BZJ4 359 aaPredicted RBP11.71□□□□□ -0.53
SDF4-204ENST00000459994 VSIRQ9H7M9 311 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 RPRMQ9NS64 109 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 C19orf73Q9NVV2 129 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 PLA2G2EQ9NZK7 142 aa11.71□□□□□ -0.53
SDF4-204ENST00000459994 ZNF98A6NK75 572 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 BUB3O43684 328 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 FOLR2P14207 255 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 RAB2AP61019 212 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 RHOBP62745 196 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 C1orf194Q5T5A4 169 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 LINC00305Q7Z4B0 112 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 OR10G4Q8NGN3 311 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 RHPN1-AS1Q9BWJ2 59 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 MRPL32Q9BYC8 188 aaKnown RBP11.7□□□□□ -0.54
SDF4-204ENST00000459994 TMEM231Q9H6L2 316 aa11.7□□□□□ -0.54
SDF4-204ENST00000459994 TECRQ9NZ01 308 aaKnown RBP11.7□□□□□ -0.54
SDF4-204ENST00000459994 CHEK1O14757 476 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 APOHP02749 345 aaPredicted RBP11.69□□□□□ -0.54
SDF4-204ENST00000459994 RAB5CP51148 216 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 FAM78BQ5VT40 261 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 RPP25LQ8N5L8 163 aaKnown RBP11.69□□□□□ -0.54
SDF4-204ENST00000459994 GRAMD2BQ96HH9 432 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 TM2D3Q9BRN9 247 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 SEPSECSQ9HD40 501 aaKnown RBP11.69□□□□□ -0.54
SDF4-204ENST00000459994 FUT9Q9Y231 359 aa11.69□□□□□ -0.54
SDF4-204ENST00000459994 DYNC2H1Q8NCM8 4307 aaKnown RBP11.69□□□□□ -0.54
SDF4-204ENST00000459994 IGHV3-49A0A0A0MS15 119 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 SULT1A2P50226 295 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 C16orf54Q6UWD8 224 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 DPPA3Q6W0C5 159 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 SCRT1Q9BWW7 348 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 ACTR3CQ9C0K3 210 aaPredicted RBP11.68□□□□□ -0.54
SDF4-204ENST00000459994 CSMD3Q7Z407 3707 aa11.68□□□□□ -0.54
SDF4-204ENST00000459994 IGHV3OR16-13A0A075B7E8 117 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 IGHV3-74A0A0B4J1X5 117 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 A0A1W2PPV4 95 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 A8MZ25 164 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 CD5P06127 495 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 CDC34P49427 236 aaPredicted RBP11.67□□□□□ -0.54
SDF4-204ENST00000459994 CD300EQ496F6 205 aaPredicted RBP11.67□□□□□ -0.54
SDF4-204ENST00000459994 MORN5Q5VZ52 161 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 FAM122CQ6P4D5 195 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 GLMPQ8WWB7 406 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 GPR82Q96P67 336 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
SDF4-204ENST00000459994 STARD9Q9P2P6 4700 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 ZNF785A8K8V0 405 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
SDF4-204ENST00000459994 TAS2R45P59539 299 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 ALKAL2Q6UX46 152 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 OR8I2Q8N0Y5 310 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 RAB24Q969Q5 203 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 FAM167A-AS1Q96KT0 104 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 MLXQ9UH92 298 aa11.66□□□□□ -0.54
SDF4-204ENST00000459994 TRAV5A0A0B4J249 113 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 IGHV3-66A0A0C4DH42 116 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 CTXND1A0A1B0GTU2 59 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 HELTA6NFD8 242 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 CD7P09564 240 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 ZNF726P1Q15940 193 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 DEFB114Q30KQ6 69 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 FAM90A2PQ658T7 463 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 LEMD1Q68G75 181 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 LCN12Q6JVE5 192 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 ZNF680Q8NEM1 530 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 STXBP6Q8NFX7 210 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 SLC25A2Q9BXI2 301 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 SLC25A22Q9H936 323 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 RETNQ9HD89 108 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
SDF4-204ENST00000459994 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
SDF4-204ENST00000459994 IFNA7P01567 189 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 HAGHQ16775 308 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 KHDC3LQ587J8 217 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 BPIFA4PQ86YQ2 179 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 OR2K2Q8NGT1 345 aa11.64□□□□□ -0.55
SDF4-204ENST00000459994 MUC7Q8TAX7 377 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms