RNA–Protein interactions for RNA: ENST00000459927.5

GPNMB-204, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-204ENST00000459927 IAPPP10997 89 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 ORM2P19652 201 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 TSPOP30536 169 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 SRPXP78539 464 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 SPINK13Q1W4C9 94 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 C6orf223Q8N319 242 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 SOSTQ9BQB4 213 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
GPNMB-204ENST00000459927 PAIP2BQ9ULR5 123 aaKnown RBP8.64□□□□□ -1.03
GPNMB-204ENST00000459927 PIGBOS1A0A0B4J2F0 54 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 PRSS46E5RG02 174 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 MED6O75586 246 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 NUDT3O95989 172 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 SMIM18P0DKX4 95 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 SLC25A6P12236 298 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 CCL18P55774 89 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 RPP30P78346 268 aaKnown RBP8.63□□□□□ -1.03
GPNMB-204ENST00000459927 LRTM2Q8N967 370 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 BPIFCQ8NFQ6 507 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 GPR82Q96P67 336 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 LINC01587Q99440 93 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 RSL24D1Q9UHA3 163 aaKnown RBP8.63□□□□□ -1.03
GPNMB-204ENST00000459927 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
GPNMB-204ENST00000459927 TRAV12-2A0A075B6T6 113 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 DUXBA0A1W2PPF3 345 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 SYNGR2O43760 224 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 INSP01308 110 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 S100A7P31151 101 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 TMEM128Q5BJH2 165 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 RNF182Q8N6D2 247 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 CIB3Q96Q77 187 aaPredicted RBP8.62□□□□□ -1.03
GPNMB-204ENST00000459927 DNAH5Q8TE73 4624 aa8.62□□□□□ -1.03
GPNMB-204ENST00000459927 WRBO00258 174 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 ATP5G1P05496 136 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 TNFSF8P32971 234 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 ATP5G3P48201 142 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 FGL1Q08830 312 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 BAP18Q8IXM2 172 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 TMEM147Q9BVK8 224 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 SLC25A39Q9BZJ4 359 aaPredicted RBP8.61□□□□□ -1.03
GPNMB-204ENST00000459927 Q9H8V8 135 aa8.61□□□□□ -1.03
GPNMB-204ENST00000459927 FABP12A6NFH5 140 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 TAS2R60P59551 318 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 SPANXN5Q5MJ07 72 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 TMEM144Q7Z5S9 345 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 TMED4Q7Z7H5 227 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 Q8N1X5 172 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 SHANK2-AS3Q9BTD1 123 aa8.6□□□□□ -1.03
GPNMB-204ENST00000459927 TIMM8BQ9Y5J9 83 aaPredicted RBP8.6□□□□□ -1.03
GPNMB-204ENST00000459927 HYPMO75409 117 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 HTN1P15515 57 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 RPL7P18124 248 aaKnown RBP8.59□□□□□ -1.03
GPNMB-204ENST00000459927 RHOBP62745 196 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 ID3Q02535 119 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 PSG3Q16557 428 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 SSX7Q7RTT5 188 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 TMEM256Q8N2U0 113 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 ZNF738Q8NE65 137 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 RNF141Q8WVD5 230 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
GPNMB-204ENST00000459927 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
GPNMB-204ENST00000459927 H3BRN7 92 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 BOLA2-SMG1P6H3BVE0 249 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 SFT2D2O95562 160 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 IL5P05113 134 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 HOXB5P09067 269 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 CXCL3P19876 107 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 PLP1P60201 277 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 RAP2BP61225 183 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 HIST1H1AQ02539 215 aaPredicted RBP8.58□□□□□ -1.04
GPNMB-204ENST00000459927 ZNF493Q6ZR52 646 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 NOP10Q9NPE3 64 aaKnown RBP8.58□□□□□ -1.04
GPNMB-204ENST00000459927 CCDC59Q9P031 241 aaKnown RBP8.58□□□□□ -1.04
GPNMB-204ENST00000459927 HIGD1AQ9Y241 93 aa8.58□□□□□ -1.04
GPNMB-204ENST00000459927 STRAPQ9Y3F4 350 aaKnown RBP8.58□□□□□ -1.04
GPNMB-204ENST00000459927 PMS2P5A8MQ11 134 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 VAMP1P23763 118 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 AKR1C1Q04828 323 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 OR5I1Q13606 314 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 CLINT1Q14677 625 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 PATE2Q6UY27 113 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 SPATA12Q7Z6I5 190 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 C16orf74Q96GX8 76 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 SLC25A21Q9BQT8 299 aaPredicted RBP8.57□□□□□ -1.04
GPNMB-204ENST00000459927 MRPS26Q9BYN8 205 aaKnown RBP8.57□□□□□ -1.04
GPNMB-204ENST00000459927 SLIRPQ9GZT3 109 aaKnown RBP8.57□□□□□ -1.04
GPNMB-204ENST00000459927 SCRT2Q9NQ03 307 aa8.57□□□□□ -1.04
GPNMB-204ENST00000459927 A0A087X0K7 114 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 OR5G3P0C626 314 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
GPNMB-204ENST00000459927 FAUP35544 74 aaKnown RBP8.56□□□□□ -1.04
GPNMB-204ENST00000459927 CDKN1BP46527 198 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 TMBIM6P55061 237 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 SELENOTP62341 195 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 PPP1R1AQ13522 171 aa8.56□□□□□ -1.04
GPNMB-204ENST00000459927 ESRGQ1W209 222 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms