RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 SLC25A4P12235 298 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 RPL27AP46776 148 aaKnown RBP8.11□□□□□ -1.11
USP39-210ENST00000459775 C1orf194Q5T5A4 169 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 HAPLN4Q86UW8 402 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 OR4A5Q8NH83 315 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 GPR82Q96P67 336 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 PARP11Q9NR21 331 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 A0A087WX48 190 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 IGLC7A0M8Q6 106 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 DNAJC9-AS1A6NH13 148 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 ATP6V0E1O15342 81 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 LYL1P12980 280 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 RUNX1Q01196 453 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 MLANAQ16655 118 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 ASPHD1Q5U4P2 390 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 BAALCQ8WXS3 180 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 CXorf58Q96LI9 332 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 PLEKHA3Q9HB20 300 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 C1RLQ9NZP8 487 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 PEMTQ9UBM1 199 aa8.11□□□□□ -1.11
USP39-210ENST00000459775 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
USP39-210ENST00000459775 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 PIGBOS1A0A0B4J2F0 54 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 FAM90A26D6RGX4 464 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 CFDP00746 253 aaPredicted RBP8.1□□□□□ -1.11
USP39-210ENST00000459775 RPL12P30050 165 aaKnown RBP8.1□□□□□ -1.11
USP39-210ENST00000459775 MFAP2P55001 183 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 RHEBQ15382 184 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 TMEM78Q5T7P6 136 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 APRG1Q8IVJ8 170 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 TMEM252Q8N6L7 170 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 OR5B3Q8NH48 314 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 ARPC1AQ92747 370 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 C19orf24Q9BVV8 132 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 ERG28Q9UKR5 140 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 ZNF257Q9Y2Q1 563 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 COL6A5A8TX70 2615 aa8.1□□□□□ -1.11
USP39-210ENST00000459775 IGHV3-21A0A0B4J1V1 117 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 C15orf62A8K5M9 175 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 HSBP1O75506 76 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 HLA-DRB1P01911 266 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 SMIM17P0DL12 118 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 ESDP10768 282 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 NPBWR1P48145 328 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 EWSR1Q01844 656 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP39-210ENST00000459775 ECSCRQ19T08 205 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 KRTAP24-1Q3LI83 254 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 HIST2H2BDQ6DRA6 164 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 LYRM2Q9NU23 88 aaPredicted RBP8.09□□□□□ -1.11
USP39-210ENST00000459775 FKBP11Q9NYL4 201 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 COX11Q9Y6N1 276 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 FAM181BA6NEQ2 426 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 CD69Q07108 199 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 EIF5AL1Q6IS14 154 aaKnown RBP8.09□□□□□ -1.11
USP39-210ENST00000459775 TOMM20LQ6UXN7 152 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 FA2HQ7L5A8 372 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 S4R3C0 116 aa8.09□□□□□ -1.11
USP39-210ENST00000459775 HMSDA8MTL9 139 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 GPR137BO60478 399 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 RNASE2P10153 161 aaKnown RBP8.08□□□□□ -1.12
USP39-210ENST00000459775 P2RY1P47900 373 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 C10orf99Q6UWK7 81 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 LCNL1Q6ZST4 164 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 TMUB2Q71RG4 321 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 ENY2Q9NPA8 101 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 MRPL27Q9P0M9 148 aaKnown RBP8.08□□□□□ -1.12
USP39-210ENST00000459775 STAB1Q9NY15 2570 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 A0A087WWL8 130 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 A0A087X0K7 114 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 PMS2P5A8MQ11 134 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 TCL1AP56279 114 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 TAS2R30P59541 319 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 OR10G4Q8NGN3 311 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 SLC25A32Q9H2D1 315 aa8.08□□□□□ -1.12
USP39-210ENST00000459775 NPIPB6E9PJ23 425 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 NDUFB8O95169 186 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 SNCAP37840 140 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
USP39-210ENST00000459775 RHOBP62745 196 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 UNQ5815/PRO19632Q6UWF5 114 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 TMEM14EPQ6UXP3 125 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 ZNF329Q86UD4 541 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 OR8I2Q8N0Y5 310 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 OR5C1Q8NGR4 320 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 OR1N2Q8NGR9 330 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 DNAJC30Q96LL9 226 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 AQP10Q96PS8 301 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 WNT10AQ9GZT5 417 aa8.07□□□□□ -1.12
USP39-210ENST00000459775 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
USP39-210ENST00000459775 A0A1W2PRE2 83 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 YIF1AO95070 293 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 GZMBP10144 247 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 NPY1RP25929 384 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 HIST3H2BBQ8N257 126 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 TEX29Q8N6K0 151 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 MS4A10Q96PG2 267 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 DUX3Q96PT4 197 aa8.06□□□□□ -1.12
USP39-210ENST00000459775 PSMG3Q9BT73 122 aaPredicted RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 MRPL36Q9P0J6 103 aaKnown RBP8.06□□□□□ -1.12
USP39-210ENST00000459775 NAT8Q9UHE5 227 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms