RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 PLP1P60201 277 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 RAP2BP61225 183 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 FCN2Q15485 313 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 SPATA31B1PQ5VZV4 182 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 TEPPQ6URK8 271 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 S100A7AQ86SG5 101 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 RSG1Q9BU20 258 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 NMES1Q9C002 83 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 SAV1Q9H4B6 383 aaPredicted RBP11.71□□□□□ -0.53
COL7A1-203ENST00000459756 CLEC5AQ9NY25 188 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 DOK5Q9P104 306 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 HIGD1AQ9Y241 93 aa11.71□□□□□ -0.53
COL7A1-203ENST00000459756 ALMS1Q8TCU4 4167 aa11.71□□□□□ -0.54
COL7A1-203ENST00000459756 PLECQ15149 4684 aaKnown RBP11.71□□□□□ -0.54
COL7A1-203ENST00000459756 FAM24AA6NFZ4 105 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 DEFB4AO15263 64 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 DEDDO75618 318 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 CXCL3P19876 107 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 IL15RAQ13261 267 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 PHLDA1Q8WV24 401 aaPredicted RBP11.7□□□□□ -0.54
COL7A1-203ENST00000459756 C16orf92Q96LL3 132 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 SCRT1Q9BWW7 348 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 SLC25A39Q9BZJ4 359 aaPredicted RBP11.7□□□□□ -0.54
COL7A1-203ENST00000459756 X6R8D5 127 aa11.7□□□□□ -0.54
COL7A1-203ENST00000459756 IGHV4-28A0A0C4DH34 117 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 H3BRN7 92 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 RLN2P04090 185 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 OR5G3P0C626 314 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 NANOS2P60321 138 aaKnown RBP11.69□□□□□ -0.54
COL7A1-203ENST00000459756 CYCSP99999 105 aaKnown RBP11.69□□□□□ -0.54
COL7A1-203ENST00000459756 ARL16Q0P5N6 197 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 ZNF546Q86UE3 836 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 PPP1R1CQ8WVI7 109 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 HRH4Q9H3N8 390 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 RPRMQ9NS64 109 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 OR5AC2Q9NZP5 309 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 XCL2Q9UBD3 114 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 RNF24Q9Y225 148 aa11.69□□□□□ -0.54
COL7A1-203ENST00000459756 CST7O76096 145 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 RBMY1A1P0DJD3 496 aaKnown RBP11.68□□□□□ -0.54
COL7A1-203ENST00000459756 RBMY1CP0DJD4 496 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 RPL7P18124 248 aaKnown RBP11.68□□□□□ -0.54
COL7A1-203ENST00000459756 DEFB1P60022 68 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 SLC38A11Q08AI6 406 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 RBMY1FQ15415 496 aaKnown RBP11.68□□□□□ -0.54
COL7A1-203ENST00000459756 PXDC1Q5TGL8 231 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 OR11H7Q8NGC8 314 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 C17orf77Q96MU5 243 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 ARL6Q9H0F7 186 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 C11orf1Q9H5F2 150 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 HYDINQ4G0P3 5121 aa11.68□□□□□ -0.54
COL7A1-203ENST00000459756 IGSF23A1L1A6 192 aa11.67□□□□□ -0.54
COL7A1-203ENST00000459756 AGPAT2O15120 278 aa11.67□□□□□ -0.54
COL7A1-203ENST00000459756 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
COL7A1-203ENST00000459756 OR4B1Q8NGF8 309 aa11.67□□□□□ -0.54
COL7A1-203ENST00000459756 LINC00476Q8WZB0 136 aa11.67□□□□□ -0.54
COL7A1-203ENST00000459756 LYRM2Q9NU23 88 aaPredicted RBP11.67□□□□□ -0.54
COL7A1-203ENST00000459756 A0A0J9YX75 114 aa11.66□□□□□ -0.54
COL7A1-203ENST00000459756 H0YIZ8 118 aa11.66□□□□□ -0.54
COL7A1-203ENST00000459756 RAB31Q13636 194 aa11.66□□□□□ -0.54
COL7A1-203ENST00000459756 C20orf173Q96LM9 149 aa11.66□□□□□ -0.54
COL7A1-203ENST00000459756 UHRF2Q96PU4 802 aa11.66□□□□□ -0.54
COL7A1-203ENST00000459756 E5RGE8 158 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 F6UB75 175 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 MPC2O95563 127 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 PET100P0DJ07 73 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 PSG9Q00887 426 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 FAM78BQ5VT40 261 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 PATE2Q6UY27 113 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 STX12Q86Y82 276 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 TMEM252Q8N6L7 170 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 ZNF709Q8N972 641 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 MGST2Q99735 147 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 ARV1Q9H2C2 271 aa11.65□□□□□ -0.54
COL7A1-203ENST00000459756 ELOA3CA0A087WX78 387 aaPredicted RBP11.64□□□□□ -0.55
COL7A1-203ENST00000459756 A0A087X0K7 114 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 C11orf94C9JXX5 98 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 SULT1A1P50225 295 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 FXYD7P58549 80 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 FGL1Q08830 312 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 ZNF705AQ6ZN79 300 aaPredicted RBP11.64□□□□□ -0.55
COL7A1-203ENST00000459756 NEU1Q99519 415 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 UQCC1Q9NVA1 299 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 MBD2Q9UBB5 411 aa11.64□□□□□ -0.55
COL7A1-203ENST00000459756 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 SMIM9A6NGZ8 99 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 ZNF705FA8MVS1 300 aaPredicted RBP11.63□□□□□ -0.55
COL7A1-203ENST00000459756 COX7A2P2O60397 106 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 LY6G6CO95867 125 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 ZNF705DP0CH99 300 aaPredicted RBP11.63□□□□□ -0.55
COL7A1-203ENST00000459756 ZNF705BP0CI00 300 aaPredicted RBP11.63□□□□□ -0.55
COL7A1-203ENST00000459756 S100A11P31949 105 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 CAMLGP49069 296 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 HBG1P69891 147 aa11.63□□□□□ -0.55
COL7A1-203ENST00000459756 HBG2P69892 147 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms