RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 INAFM1C9JVW0 142 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 H3BQ15 152 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 NPPCP23582 126 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 Q71RC1 249 aaPredicted RBP18.79■□□□□ 0.6
U2AF1-204ENST00000459639 CLRN3Q8NCR9 226 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 BLNKQ8WV28 456 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 METTL26Q96S19 204 aa18.79■□□□□ 0.6
U2AF1-204ENST00000459639 SCO2A0A1W2PP80 73 aa18.78■□□□□ 0.6
U2AF1-204ENST00000459639 ZNF727A8MUV8 499 aa18.78■□□□□ 0.6
U2AF1-204ENST00000459639 IGLC2P0DOY2 106 aa18.78■□□□□ 0.6
U2AF1-204ENST00000459639 RPL7P18124 248 aaKnown RBP18.78■□□□□ 0.6
U2AF1-204ENST00000459639 ATRAIDQ6UW56 229 aa18.78■□□□□ 0.6
U2AF1-204ENST00000459639 SMIM7Q9BQ49 75 aa18.78■□□□□ 0.6
U2AF1-204ENST00000459639 LGALS1P09382 135 aaKnown RBP18.77■□□□□ 0.6
U2AF1-204ENST00000459639 SUMO1P63165 101 aaKnown RBP18.77■□□□□ 0.6
U2AF1-204ENST00000459639 C16orf95Q9H693 158 aa18.77■□□□□ 0.6
U2AF1-204ENST00000459639 ZNF586Q9NXT0 402 aa18.77■□□□□ 0.6
U2AF1-204ENST00000459639 MTORP42345 2549 aa18.77■□□□□ 0.6
U2AF1-204ENST00000459639 CRYBB3P26998 211 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 MYCNOSP40205 109 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 OR5B12Q96R08 314 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 TCEAL7Q9BRU2 100 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 C20orf24Q9BUV8 137 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 BUB3O43684 328 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 SCO1O75880 301 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 NDUFB4O95168 129 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 ZNF674Q2M3X9 581 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 TMEM190Q8WZ59 177 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 TVP23CQ96ET8 276 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 U3KQE9 123 aa18.76■□□□□ 0.59
U2AF1-204ENST00000459639 SNRPCP09234 159 aaKnown RBP18.75■□□□□ 0.59
U2AF1-204ENST00000459639 RANP62826 216 aaKnown RBP18.75■□□□□ 0.59
U2AF1-204ENST00000459639 C1orf194Q5T5A4 169 aa18.75■□□□□ 0.59
U2AF1-204ENST00000459639 OR8I2Q8N0Y5 310 aa18.75■□□□□ 0.59
U2AF1-204ENST00000459639 GPR82Q96P67 336 aa18.75■□□□□ 0.59
U2AF1-204ENST00000459639 ELOVL1Q9BW60 279 aa18.75■□□□□ 0.59
U2AF1-204ENST00000459639 TRBV19A0A075B6N1 114 aa18.74■□□□□ 0.59
U2AF1-204ENST00000459639 PNRC1Q12796 327 aaPredicted RBP18.74■□□□□ 0.59
U2AF1-204ENST00000459639 AWAT1Q58HT5 328 aa18.74■□□□□ 0.59
U2AF1-204ENST00000459639 UNQ9165/PRO28630Q6UXU0 137 aa18.74■□□□□ 0.59
U2AF1-204ENST00000459639 NAT8Q9UHE5 227 aa18.74■□□□□ 0.59
U2AF1-204ENST00000459639 M0R036 132 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 PDE6HQ13956 83 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 WIPF2Q8TF74 440 aaPredicted RBP18.73■□□□□ 0.59
U2AF1-204ENST00000459639 H3BTX0 84 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 GPHB5Q86YW7 130 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 Q9H3A6 140 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 SDF2L1Q9HCN8 221 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 OTORQ9NRC9 128 aa18.73■□□□□ 0.59
U2AF1-204ENST00000459639 FLNBO75369 2602 aaKnown RBP18.72■□□□□ 0.59
U2AF1-204ENST00000459639 ZNF207O43670 478 aaKnown RBP18.72■□□□□ 0.59
U2AF1-204ENST00000459639 RHEBQ15382 184 aa18.72■□□□□ 0.59
U2AF1-204ENST00000459639 TMEM241Q24JQ0 296 aa18.72■□□□□ 0.59
U2AF1-204ENST00000459639 LYPD1Q8N2G4 141 aa18.72■□□□□ 0.59
U2AF1-204ENST00000459639 DERL1Q9BUN8 251 aa18.72■□□□□ 0.59
U2AF1-204ENST00000459639 NDUFA7O95182 113 aa18.71■□□□□ 0.59
U2AF1-204ENST00000459639 CDX1P47902 265 aaPredicted RBP18.71■□□□□ 0.59
U2AF1-204ENST00000459639 FAM106AQ4KMX7 169 aa18.71■□□□□ 0.59
U2AF1-204ENST00000459639 C2CD4CQ8TF44 421 aa18.71■□□□□ 0.59
U2AF1-204ENST00000459639 PGPA6NDG6 321 aa18.7■□□□□ 0.58
U2AF1-204ENST00000459639 C5orf17Q8NAS9 161 aa18.7■□□□□ 0.58
U2AF1-204ENST00000459639 LINC01006Q8NI28 216 aa18.7■□□□□ 0.58
U2AF1-204ENST00000459639 HIVEP1P15822 2718 aa18.7■□□□□ 0.58
U2AF1-204ENST00000459639 BAHCC1Q9P281 2608 aa18.7■□□□□ 0.58
U2AF1-204ENST00000459639 CRLF1O75462 422 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 APOHP02749 345 aaPredicted RBP18.69■□□□□ 0.58
U2AF1-204ENST00000459639 SLC25A5P05141 298 aaKnown RBP18.69■□□□□ 0.58
U2AF1-204ENST00000459639 ATF4P18848 351 aaPredicted RBP18.69■□□□□ 0.58
U2AF1-204ENST00000459639 RPEL1Q2QD12 228 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 TCTEX1D4Q5JR98 221 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 HIST1H2BAQ96A08 127 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 C17orf77Q96MU5 243 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 A0A087X0K7 114 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 K7EMT4 169 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 PEX7O00628 323 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 TCF21O43680 179 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 GALR1P47211 349 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 SIGLEC15Q6ZMC9 328 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 SMAD5-AS1Q9Y6J3 95 aa18.69■□□□□ 0.58
U2AF1-204ENST00000459639 ZNF320A2RRD8 509 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 C7orf77A4D0Y5 90 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 ZNF253O75346 499 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 RPL35P42766 123 aaKnown RBP18.68■□□□□ 0.58
U2AF1-204ENST00000459639 C16orf54Q6UWD8 224 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 C4orf3Q8WVX3 66 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 WFDC12Q8WWY7 111 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 DAZ1Q9NQZ3 744 aaKnown RBP18.68■□□□□ 0.58
U2AF1-204ENST00000459639 EPDR1Q9UM22 224 aa18.68■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV4OR15-8A0A075B7B6 117 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 A0A087WW49 117 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 B4DEV8 164 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 C9JCJ5 164 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 SLC17A3O00476 420 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 AKR1C3P42330 323 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 PSG9Q00887 426 aa18.67■□□□□ 0.58
U2AF1-204ENST00000459639 NSD1Q96L73 2696 aaPredicted RBP18.67■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV3-49A0A0A0MS15 119 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 IGHV3-66A0A0C4DH42 116 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 A0A1W2PS18 150 aa18.66■□□□□ 0.58
U2AF1-204ENST00000459639 RPL23P62829 140 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms