RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 TOMM20LQ6UXN7 152 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SIGLEC15Q6ZMC9 328 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 RBPMS2Q6ZRY4 209 aaKnown RBP4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR11H1Q8NG94 326 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR1N2Q8NGR9 330 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 LINC01006Q8NI28 216 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 TMEM37Q8WXS4 190 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 HIST1H2BAQ96A08 127 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 CCDC140Q96MF4 163 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SMIM7Q9BQ49 75 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 NDFIP1Q9BT67 221 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 CHRDL1Q9BU40 450 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 KLK15Q9H2R5 256 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 SERTAD4Q9NUC0 356 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 PPP1R14DQ9NXH3 145 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 DMRT1Q9Y5R6 373 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 RFNGQ9Y644 331 aa4.53□□□□□ -1.68
RNU1-88P-201ENST00000459274 CREBBPQ92793 2442 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 ABCA12Q86UK0 2595 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 LOC102723971A0A1B0GUV8 181 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 A0A1W2PRX2 142 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 TMEM218A2RU14 115 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 B4DEV8 164 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 H3BRN7 92 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 LGALS9O00182 355 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 AKR1C3P42330 323 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 CMC4P56277 68 aaPredicted RBP4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 CFHR3Q02985 330 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 Q6ZS46 218 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 C5orf17Q8NAS9 161 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 TVP23CQ96ET8 276 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 C16orf92Q96LL3 132 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 RARRES2Q99969 163 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 SLC25A2Q9BXI2 301 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 TMPRSS5Q9H3S3 457 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 OTORQ9NRC9 128 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 MRPL36Q9P0J6 103 aaKnown RBP4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 RPH3ALQ9UNE2 315 aa4.52□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV3OR16-8A0A075B7F1 116 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 TRAV5A0A0B4J249 113 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 IGHV7-4-1A0A0J9YVY3 117 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 FAM74A7A6NL05 159 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CCL24O00175 119 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF207O43670 478 aaKnown RBP4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF253O75346 499 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 MT-ND4LP03901 98 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CT45A10P0DMU9 189 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 PYYP10082 97 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 S100PP25815 95 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CRYBB3P26998 211 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 HOXD3P31249 432 aaPredicted RBP4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 ADMP35318 185 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 GNG4P50150 75 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 SYNJ2BPP57105 145 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CCL20P78556 96 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 RHEBQ15382 184 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 USF2Q15853 346 aaPredicted RBP4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 ZNF726P1Q15940 193 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 LEMD1Q68G75 181 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 PATE2Q6UY27 113 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 NDUFA11Q86Y39 141 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CCDC28AQ8IWP9 274 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 C15orf54Q8N8G6 183 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 RNF152Q8N8N0 203 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 BTF3L4Q96K17 158 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 RHPN1-AS1Q9BWJ2 59 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 SCRT1Q9BWW7 348 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 Q9H3A6 140 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 ESM1Q9NQ30 184 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 NAT8Q9UHE5 227 aa4.51□□□□□ -1.69
RNU1-88P-201ENST00000459274 CCDC168Q8NDH2 2452 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 POLQO75417 2590 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 TRBV19A0A075B6N1 114 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 OVOL1O14753 267 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 PPP1R2P9O14990 202 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 BUB3O43684 328 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 NDUFB4O95168 129 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 SRP19P09132 144 aaKnown RBP4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 MYCNOSP40205 109 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 TAS2R60P59551 318 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 KIAA0141Q14154 515 aaPredicted RBP4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 ICAM4Q14773 271 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 NSUN5P1Q3KNT7 163 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 SAPCD1Q5SSQ6 148 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 SPATA31B1PQ5VZV4 182 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 REC114Q7Z4M0 266 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 KRTAP19-1Q8IUB9 90 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 ARL6IP6Q8N6S5 226 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 C3orf56Q8N813 242 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 C11orf44Q8N8P7 122 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 OR9G4Q8NGQ1 327 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 OR10J6PQ8NGY7 276 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 TMEM158Q8WZ71 300 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 FMC1Q96HJ9 113 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 ATG101Q9BSB4 218 aa4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 MCRIP2Q9BUT9 160 aaKnown RBP4.5□□□□□ -1.69
RNU1-88P-201ENST00000459274 RPS10P5Q9NQ39 176 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms