RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 Q6ZWC4 215 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 Q96MF0 132 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 SIGMAR1Q99720 223 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 RPUSD1Q9UJJ7 312 aaKnown RBP9.44□□□□□ -0.9
SYNE2-207ENST00000458046 GGTLC3B5MD39 225 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 LY6DQ14210 128 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 SLC25A48Q6ZT89 311 aaKnown RBP9.44□□□□□ -0.9
SYNE2-207ENST00000458046 MUC15Q8N387 334 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 HSPB9Q9BQS6 159 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 TMEM167BQ9NRX6 74 aa9.44□□□□□ -0.9
SYNE2-207ENST00000458046 E7EUB6 86 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 MGST1P10620 155 aaKnown RBP9.43□□□□□ -0.9
SYNE2-207ENST00000458046 IRF2P14316 349 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 CCL3L1P16619 93 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 CHRNB4P30926 498 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 TCTEX1D4Q5JR98 221 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 C1orf194Q5T5A4 169 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 MORN5Q5VZ52 161 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 TOMM20LQ6UXN7 152 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 THAP8Q8NA92 274 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 RCHY1Q96PM5 261 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 MRPL20Q9BYC9 149 aaKnown RBP9.43□□□□□ -0.9
SYNE2-207ENST00000458046 SERTAD4Q9NUC0 356 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 TMEM106BQ9NUM4 274 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 ZNF257Q9Y2Q1 563 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 RNASE2P10153 161 aaKnown RBP9.43□□□□□ -0.9
SYNE2-207ENST00000458046 TPPP2P59282 170 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 LINC00479Q96M42 142 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 FAM103A1Q9BTL3 118 aaKnown RBP9.43□□□□□ -0.9
SYNE2-207ENST00000458046 SNHG12Q9BXW3 62 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 THYN1Q9P016 225 aa9.43□□□□□ -0.9
SYNE2-207ENST00000458046 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-207ENST00000458046 K7EM74 188 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 GYPEP15421 78 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 RPL13AP40429 203 aaKnown RBP9.42□□□□□ -0.9
SYNE2-207ENST00000458046 GRAMD2BQ96HH9 432 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 DUX3Q96PT4 197 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 SFXN3Q9BWM7 321 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 SAMD10Q9BYL1 202 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 NAT8BQ9UHF3 227 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 hADV38S2A0JD32 116 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 TDGF1P3P51864 188 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 DIAPH2-AS1Q14236 149 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 TIGITQ495A1 244 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 C2orf83Q53S99 150 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 NEU4Q8WWR8 484 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-207ENST00000458046 COMMD5Q9GZQ3 224 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 LY96Q9Y6Y9 160 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
SYNE2-207ENST00000458046 AKAP13Q12802 2813 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 FNDC10F2Z333 226 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
SYNE2-207ENST00000458046 MRPL54Q6P161 138 aaKnown RBP9.41□□□□□ -0.9
SYNE2-207ENST00000458046 ZNF705AQ6ZN79 300 aaPredicted RBP9.41□□□□□ -0.9
SYNE2-207ENST00000458046 VN1R17PQ8TDU5 208 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 SLC25A33Q9BSK2 321 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 DSCAML1Q8TD84 2053 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 TRAV9-1A0A075B6T8 112 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 FAM231BA6NCW3 169 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 GNG7O60262 68 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 C10orf55Q5SWW7 151 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 SLC35E1Q96K37 410 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 CEP295Q9C0D2 2601 aa9.41□□□□□ -0.9
SYNE2-207ENST00000458046 OR5G3P0C626 314 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 TAS2R45P59539 299 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 C12orf54Q6X4T0 127 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 Q71RC1 249 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 NIT1Q86X76 327 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 H1FXQ92522 213 aaKnown RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 LINC00574Q9H8X3 128 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 BET1LQ9NYM9 111 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 PAM16Q9Y3D7 125 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 RAI1Q7Z5J4 1906 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 OVOL3O00110 214 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 ATP5LO75964 103 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 IGLV2-8P01709 118 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 PYYP10082 97 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 RPL8P62917 257 aaKnown RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 CX3CL1P78423 397 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 IBA57Q5T440 356 aaKnown RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 OR1L8Q8NGR8 309 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 FAM168AQ92567 244 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 SSBP3Q9BWW4 388 aaPredicted RBP9.4□□□□□ -0.9
SYNE2-207ENST00000458046 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 NDUFA4L2Q9NRX3 87 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 RNF114Q9Y508 228 aa9.4□□□□□ -0.9
SYNE2-207ENST00000458046 TEX15Q9BXT5 2789 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 H0YJW9 148 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 APOA2P02652 100 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
SYNE2-207ENST00000458046 ERHP84090 104 aaKnown RBP9.39□□□□□ -0.91
SYNE2-207ENST00000458046 TPTE2P1Q5T6R2 138 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 ZNF833PQ6ZTB9 187 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 LINC00312Q9Y6C7 94 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 ABCA12Q86UK0 2595 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 PIEZO2Q9H5I5 2752 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 DYSFO75923 2080 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 BSNQ9UPA5 3926 aa9.39□□□□□ -0.91
SYNE2-207ENST00000458046 M0R143 59 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms