RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 RNF126Q9BV68 326 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 GOLT1BQ9Y3E0 138 aa11.32□□□□□ -0.6
CHCHD3-204ENST00000457942 PKD1P98161 4303 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 TMEM189A5PLL7 270 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF98A6NK75 572 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 SSSCA1O60232 199 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 SCGB1D2O95969 90 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 IFNA21P01568 189 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 SPART-AS1P0CW21 52 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 POLR2GP62487 172 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 PSG9Q00887 426 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 FGL1Q08830 312 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 ASAH1Q13510 395 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 MZT2BQ6NZ67 158 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 ENKURQ8TC29 256 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 NEU1Q99519 415 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 PSENENQ9NZ42 101 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 DOK5Q9P104 306 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 SLC45A2Q9UMX9 530 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 RFNGQ9Y644 331 aa11.31□□□□□ -0.6
CHCHD3-204ENST00000457942 SMIM9A6NGZ8 99 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF705FA8MVS1 300 aaPredicted RBP11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 AMBPP02760 352 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF705DP0CH99 300 aaPredicted RBP11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF705BP0CI00 300 aaPredicted RBP11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 ZNF709Q8N972 641 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 GPR82Q96P67 336 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 TMEM208Q9BTX3 173 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
CHCHD3-204ENST00000457942 A0A0J9YX75 114 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 HBE1P02100 147 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 IL5P05113 134 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 PAX9P55771 341 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 RAP2BP61225 183 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 C20orf173Q96LM9 149 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 SCRT1Q9BWW7 348 aa11.29□□□□□ -0.6
CHCHD3-204ENST00000457942 TEX48A0A1B0GUV7 120 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 FAM25EA8MYX2 175 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 RRAS2P62070 204 aaPredicted RBP11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 TMEM182Q6ZP80 229 aaPredicted RBP11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 CYP2G1PQ6ZSU1 146 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 LINC00336Q6ZUF6 198 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 TMEM144Q7Z5S9 345 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 MITD1Q8WV92 249 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 CLUHP3Q96NS8 147 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 HIGD1AQ9Y241 93 aa11.28□□□□□ -0.6
CHCHD3-204ENST00000457942 LOC102723971A0A1B0GUV8 181 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 OR5G3P0C626 314 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 P0DMU3 169 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 FAM231AP0DMU4 169 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 FAM231CP0DMU5 169 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 HTN3P15516 51 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 IAH1Q2TAA2 248 aaPredicted RBP11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 FAM222AQ5U5X8 452 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 NRARPQ7Z6K4 114 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 OR4D5Q8NGN0 318 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 ZNF431Q8TF32 576 aaPredicted RBP11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 GSKIPQ9P0R6 139 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 MGAT4CQ9UBM8 478 aa11.27□□□□□ -0.61
CHCHD3-204ENST00000457942 H3BRN7 92 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 M0R2N4 97 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 METTL15P1P0C7V9 234 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 LINC00869P0C866 280 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 ID3Q02535 119 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 RRN3P1Q2M238 152 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 S100A7AQ86SG5 101 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 UBE2DNLQ8IWF7 75 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 ZBTB8BQ8NAP8 495 aaPredicted RBP11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 ZNF738Q8NE65 137 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 DKK2Q9UBU2 259 aa11.26□□□□□ -0.61
CHCHD3-204ENST00000457942 HYPMO75409 117 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 INSP01308 110 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 RNF182Q8N6D2 247 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 LRRC20Q8TCA0 184 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 SMIM8Q96KF7 97 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 SHANK2-AS3Q9BTD1 123 aa11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 YTHDF2Q9Y5A9 579 aaKnown RBP11.25□□□□□ -0.61
CHCHD3-204ENST00000457942 HSPG2P98160 4391 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 C5orf51A6NDU8 294 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 CCNKO75909 580 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 SELENOTP62341 195 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 DLK1P80370 383 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 SPINK13Q1W4C9 94 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 ZNF575Q86XF7 245 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
CHCHD3-204ENST00000457942 POM121L12Q8N7R1 296 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms