RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 FAM74A7A6NL05 159 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 NUPL2O15504 423 aaKnown RBP6.66□□□□□ -1.34
RIF1-208ENST00000457745 OR7C2O60412 319 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 SCO1O75880 301 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 HBE1P02100 147 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 ELANEP08246 267 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 LGALS1P09382 135 aaKnown RBP6.66□□□□□ -1.34
RIF1-208ENST00000457745 SFTA3P0C7M3 94 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 HLA-DMBP28068 263 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 SLURP1P55000 103 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 PROK1P58294 105 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 GNG5P63218 68 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 IGFL4Q6B9Z1 124 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 TEX38Q6PEX7 206 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 CYB561D1Q8N8Q1 229 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 OR1L4Q8NGR5 311 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 TMEM190Q8WZ59 177 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 USMG5Q96IX5 58 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 PAXXQ9BUH6 204 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 DERL1Q9BUN8 251 aa6.66□□□□□ -1.34
RIF1-208ENST00000457745 MRPL32Q9BYC8 188 aaKnown RBP6.66□□□□□ -1.34
RIF1-208ENST00000457745 TECRQ9NZ01 308 aaKnown RBP6.66□□□□□ -1.34
RIF1-208ENST00000457745 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 NDUFA7O95182 113 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 CXorf1O96002 111 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 IGLC2P0DOY2 106 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 ZP3P21754 424 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 MYCNOSP40205 109 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 UBE2L3P68036 154 aaKnown RBP6.65□□□□□ -1.34
RIF1-208ENST00000457745 TM4SF20Q53R12 229 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 C10orf91Q5T1B1 145 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 GPHB5Q86YW7 130 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 COMMD1Q8N668 190 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 Q8WTZ3 238 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 ASCL2Q99929 193 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 CITED2Q99967 270 aaPredicted RBP6.65□□□□□ -1.34
RIF1-208ENST00000457745 C20orf24Q9BUV8 137 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 ELOVL1Q9BW60 279 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 OR51M1Q9H341 326 aa6.65□□□□□ -1.34
RIF1-208ENST00000457745 PEF1Q9UBV8 284 aaKnown RBP6.65□□□□□ -1.34
RIF1-208ENST00000457745 SETD2Q9BYW2 2564 aaPredicted RBP6.65□□□□□ -1.34
RIF1-208ENST00000457745 TRBV20OR9-2A0A075B6H5 130 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 TMEM213A2RRL7 107 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 PMS2P11Q13670 270 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 KHDC3LQ587J8 217 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 UQCC3Q6UW78 93 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 CCDC28AQ8IWP9 274 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 EXOC3-AS1Q8N2X6 119 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 BLNKQ8WV28 456 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 GLMPQ8WWB7 406 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 NARS2Q96I59 477 aaKnown RBP6.64□□□□□ -1.35
RIF1-208ENST00000457745 RAX2Q96IS3 184 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 UBE2E2Q96LR5 201 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 PFDN5Q99471 154 aa6.64□□□□□ -1.35
RIF1-208ENST00000457745 EIF5A2Q9GZV4 153 aaKnown RBP6.64□□□□□ -1.35
RIF1-208ENST00000457745 TRAV8-2A0A0B4J237 113 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 PGPEP1LA6NFU8 196 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 NUDT19A8MXV4 375 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 C11orf94C9JXX5 98 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 NDUFA4O00483 81 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 TCF21O43680 179 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 BUB3O43684 328 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 CRYBB3P26998 211 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 HOXD3P31249 432 aaPredicted RBP6.63□□□□□ -1.35
RIF1-208ENST00000457745 CEBPGP53567 150 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 SYNJ2BPP57105 145 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 DEFB1P60022 68 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 SLC35B1P78383 322 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 MEF2BQ02080 365 aaPredicted RBP6.63□□□□□ -1.35
RIF1-208ENST00000457745 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 SIGLEC15Q6ZMC9 328 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 PQLC2Q6ZP29 291 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 PRIMA1Q86XR5 153 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 KLHL30-AS1Q8NEE0 82 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 OR4F5Q8NH21 305 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 LINC00479Q96M42 142 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 OR4F4Q96R69 305 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 RNF2Q99496 336 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 C19orf24Q9BVV8 132 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 TMEM14CQ9P0S9 112 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 RABAC1Q9UI14 185 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 VAX2Q9UIW0 290 aa6.63□□□□□ -1.35
RIF1-208ENST00000457745 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
RIF1-208ENST00000457745 TRBV19A0A075B6N1 114 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 A0A0G2JLM5 398 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 M0R3E3 92 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 GGCTO75223 188 aaKnown RBP6.62□□□□□ -1.35
RIF1-208ENST00000457745 AKR1C3P42330 323 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 CDX1P47902 265 aaPredicted RBP6.62□□□□□ -1.35
RIF1-208ENST00000457745 PSMB3P49720 205 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 PEA15Q15121 130 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 KHDC1LQ5JSQ8 128 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 CST9LP1Q5W188 147 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 C16orf54Q6UWD8 224 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 C4orf3Q8WVX3 66 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 RPUSD4Q96CM3 377 aaKnown RBP6.62□□□□□ -1.35
RIF1-208ENST00000457745 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
RIF1-208ENST00000457745 SGK494Q96LW2 274 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms