RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SMIM3Q9BZL3 60 aa7.47□□□□□ -1.21
ATG4A-206ENST00000457035 WDR61Q9GZS3 305 aaKnown RBP7.47□□□□□ -1.21
ATG4A-206ENST00000457035 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
ATG4A-206ENST00000457035 DNAJC4Q9NNZ3 241 aa7.47□□□□□ -1.21
ATG4A-206ENST00000457035 UBQLN2Q9UHD9 624 aa7.47□□□□□ -1.21
ATG4A-206ENST00000457035 HIGD1AQ9Y241 93 aa7.47□□□□□ -1.21
ATG4A-206ENST00000457035 TENM3Q9P273 2699 aa7.46□□□□□ -1.21
ATG4A-206ENST00000457035 EREGO14944 169 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 CMC4P56277 68 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-206ENST00000457035 B2MP61769 119 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 LEMD1Q68G75 181 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 Q6ZRG5 221 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 SBSPONQ8IVN8 264 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 STXBP6Q8NFX7 210 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 SLC25A32Q9H2D1 315 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 TUBA4BQ9H853 241 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 NRN1Q9NPD7 142 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 FBXL17Q9UF56 701 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 TNFSF18Q9UNG2 199 aa7.46□□□□□ -1.22
ATG4A-206ENST00000457035 RNF222A6NCQ9 220 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 RBMY1BA6NDE4 496 aaKnown RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 RBMY1EA6NEQ0 496 aaKnown RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 SMLR1H3BR10 107 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 MRPS12O15235 138 aaKnown RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 RBMY1DP0C7P1 496 aaKnown RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 S100A7P31151 101 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 MORN5Q5VZ52 161 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 C10orf113Q5VZT2 155 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 LINC00305Q7Z4B0 112 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 RSG1Q9BU20 258 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 PARD6GQ9BYG4 376 aaPredicted RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 SRD5A3Q9H8P0 318 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 SLC25A22Q9H936 323 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 MAP6D1Q9H9H5 199 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 SEPSECSQ9HD40 501 aaKnown RBP7.45□□□□□ -1.22
ATG4A-206ENST00000457035 PXMP4Q9Y6I8 212 aa7.45□□□□□ -1.22
ATG4A-206ENST00000457035 FXYD6-FXYD2A0A087WZ82 144 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 SOCS3O14543 225 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 COX7A2P2O60397 106 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 IFNA5P01569 189 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 DEFB131AP59861 70 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 ZNF124Q15973 351 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 GCSAMLQ5JQS6 135 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 S100A7AQ86SG5 101 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 APRG1Q8IVJ8 170 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 INO80EQ8NBZ0 244 aaPredicted RBP7.44□□□□□ -1.22
ATG4A-206ENST00000457035 OR11H4Q8NGC9 324 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 OR1L4Q8NGR5 311 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 GATAD1Q8WUU5 269 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 ST6GAL2Q96JF0 529 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 GPR82Q96P67 336 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 ASCL2Q99929 193 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 RFNGQ9Y644 331 aa7.44□□□□□ -1.22
ATG4A-206ENST00000457035 TRAV5A0A0B4J249 113 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 ZNF688P0C7X2 276 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 RPL7P18124 248 aaKnown RBP7.43□□□□□ -1.22
ATG4A-206ENST00000457035 GALR1P47211 349 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 HAGHQ16775 308 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 ZNF709Q8N972 641 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 PFDN5Q99471 154 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 STAB2Q8WWQ8 2551 aa7.43□□□□□ -1.22
ATG4A-206ENST00000457035 HMSDA8MTL9 139 aa7.42□□□□□ -1.22
ATG4A-206ENST00000457035 C17orf112F2Z3M2 114 aa7.42□□□□□ -1.22
ATG4A-206ENST00000457035 ARPC5O15511 151 aa7.42□□□□□ -1.22
ATG4A-206ENST00000457035 NHLRC4P0CG21 123 aaPredicted RBP7.42□□□□□ -1.22
ATG4A-206ENST00000457035 RNF24Q9Y225 148 aa7.42□□□□□ -1.22
ATG4A-206ENST00000457035 A0A087X0K7 114 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 LOC102724200A0A096LPH7 203 aaPredicted RBP7.41□□□□□ -1.22
ATG4A-206ENST00000457035 ISLRO14498 428 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 ID1P41134 155 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 MEOX2P50222 304 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 SNRPD3P62318 126 aaKnown RBP7.41□□□□□ -1.22
ATG4A-206ENST00000457035 ZNF266Q14584 549 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 PSMG4Q5JS54 123 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 FAM78BQ5VT40 261 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 SPATA31B1PQ5VZV4 182 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 RPL7L1Q6DKI1 246 aaKnown RBP7.41□□□□□ -1.22
ATG4A-206ENST00000457035 BPIFA4PQ86YQ2 179 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 FAM167A-AS1Q96KT0 104 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 MFFQ9GZY8 342 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 KCNIP2Q9NS61 270 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 TIMM9Q9Y5J7 89 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 DNAH7Q8WXX0 4024 aa7.41□□□□□ -1.22
ATG4A-206ENST00000457035 TRAV8-2A0A0B4J237 113 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 A0A1B0GVG6 124 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 SCO2A0A1W2PP80 73 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 KNCNA6PVL3 124 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 H3BQ15 152 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 SNRPCP09234 159 aaKnown RBP7.4□□□□□ -1.22
ATG4A-206ENST00000457035 IGLC2P0DOY2 106 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 ATF4P18848 351 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-206ENST00000457035 ATP6V0CP27449 155 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 PSMB3P49720 205 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 SAMD13Q5VXD3 122 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms