RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 RPL7P18124 248 aaKnown RBP13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 CAMLGP49069 296 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 BAXQ07812 192 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 ATP6V1FQ16864 119 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 Q6ZRG5 221 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 UHRF2Q96PU4 802 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 STAB2Q8WWQ8 2551 aa13.25□□□□□ -0.29
PDLIM2-215ENST00000456545 AGRNO00468 2067 aa13.24□□□□□ -0.29
PDLIM2-215ENST00000456545 EBLN2Q6P2I7 272 aa13.24□□□□□ -0.29
PDLIM2-215ENST00000456545 LRRC20Q8TCA0 184 aa13.24□□□□□ -0.29
PDLIM2-215ENST00000456545 MGST2Q99735 147 aa13.24□□□□□ -0.29
PDLIM2-215ENST00000456545 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
PDLIM2-215ENST00000456545 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
PDLIM2-215ENST00000456545 H3BMM0 161 aa13.23□□□□□ -0.29
PDLIM2-215ENST00000456545 IGKV3-20P01619 116 aa13.23□□□□□ -0.29
PDLIM2-215ENST00000456545 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
PDLIM2-215ENST00000456545 ELOA3CA0A087WX78 387 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 C10orf113Q5VZT2 155 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 PATE2Q6UY27 113 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 FOXI2Q6ZQN5 318 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 OR4B1Q8NGF8 309 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 WDR83OSQ9Y284 106 aa13.22□□□□□ -0.29
PDLIM2-215ENST00000456545 CXorf65A6NEN9 183 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 SOCS3O14543 225 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 PET100P0DJ07 73 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 HLA-DRB4P13762 266 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 FGF7P21781 194 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 NHLH2Q02577 135 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 MIC13Q5XKP0 118 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 OR1L4Q8NGR5 311 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 PPP1R1CQ8WVI7 109 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 DNAJC4Q9NNZ3 241 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 CLEC5AQ9NY25 188 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 OR5AC2Q9NZP5 309 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 HLA-DRB4X5D2U9 266 aa13.21□□□□□ -0.29
PDLIM2-215ENST00000456545 PTTG1O95997 202 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 H2BFSP57053 126 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 DEFB1P60022 68 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 EWSR1Q01844 656 aaKnown RBP eCLIP13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 PMS2P11Q13670 270 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 VWC2Q2TAL6 325 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 OR5C1Q8NGR4 320 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 XCL2Q9UBD3 114 aa13.2□□□□□ -0.3
PDLIM2-215ENST00000456545 C4BPBP20851 252 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 GDF5OSQ5U4N7 250 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 BPIFA4PQ86YQ2 179 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 PFDN5Q99471 154 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 ALG5Q9Y673 324 aa13.19□□□□□ -0.3
PDLIM2-215ENST00000456545 MPDU1O75352 247 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 MPC2O95563 127 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 GIG44P09565 113 aaPredicted RBP13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 RPL29P47914 159 aaKnown RBP13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 FXYD7P58549 80 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 B2MP61769 119 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 C20orf173Q96LM9 149 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
PDLIM2-215ENST00000456545 F6UB75 175 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 H0YIZ8 118 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 DEFB4AO15263 64 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 PSG9Q00887 426 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 CLINT1Q14677 625 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 FAM78BQ5VT40 261 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 MED28Q9H204 178 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 PXMP4Q9Y6I8 212 aa13.17□□□□□ -0.3
PDLIM2-215ENST00000456545 A0A087X0K7 114 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 A0A0J9YX75 114 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 DUSP14O95147 198 aaKnown RBP13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 MIFP14174 115 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 PRR20EP86478 221 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 PRR20CP86479 221 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 PRR20DP86480 221 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 PRR20BP86481 221 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 PRR20AP86496 221 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 OPCMLQ14982 345 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 RNF182Q8N6D2 247 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 C11orf45Q8TAV5 145 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 THAP6Q8TBB0 222 aa13.16□□□□□ -0.3
PDLIM2-215ENST00000456545 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 CHAC2Q8WUX2 184 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 C17orf77Q96MU5 243 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 CLUHP3Q96NS8 147 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 RNF126Q9BV68 326 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 C11orf68Q9H3H3 251 aaKnown RBP13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 PPP1R14DQ9NXH3 145 aa13.15□□□□□ -0.3
PDLIM2-215ENST00000456545 IGHV3OR16-12A0A075B7B8 117 aa13.14□□□□□ -0.31
PDLIM2-215ENST00000456545 TRAV8-2A0A0B4J237 113 aa13.14□□□□□ -0.31
PDLIM2-215ENST00000456545 C17orf112F2Z3M2 114 aa13.14□□□□□ -0.31
PDLIM2-215ENST00000456545 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
PDLIM2-215ENST00000456545 LCN15Q6UWW0 184 aa13.14□□□□□ -0.31
PDLIM2-215ENST00000456545 CSNK1G2-AS1Q8NCQ2 148 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms