RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 RPRMLQ8N4K4 120 aa8.21□□□□□ -1.09
CLIP4-208ENST00000456385 ZADH2Q8N4Q0 377 aa8.21□□□□□ -1.09
CLIP4-208ENST00000456385 RAB9BQ9NP90 201 aa8.21□□□□□ -1.09
CLIP4-208ENST00000456385 SERTM2A0A1B0GWG4 89 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 INS-IGF2F8WCM5 200 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 NKX2-8O15522 239 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 FABP2P12104 132 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 AZU1P20160 251 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 SUB1P53999 127 aaKnown RBP eCLIP8.21□□□□□ -1.1
CLIP4-208ENST00000456385 RIGQ13278 110 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 LPAL2Q16609 132 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 SAMD5Q5TGI4 173 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 C16orf54Q6UWD8 224 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 FAM222BQ8WU58 562 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 DPF1Q92782 380 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 C18orf15Q96N68 181 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 TTTY13Q9BZ97 58 aa8.21□□□□□ -1.1
CLIP4-208ENST00000456385 K7EMI3 77 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 K7ERJ3 54 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 SLC25A17O43808 307 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 CCL3L1P16619 93 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 FCGR2BP31994 310 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-208ENST00000456385 SMAGPQ0VAQ4 97 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 LGALS9BQ3B8N2 356 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 LGALS9CQ6DKI2 356 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 OR9G4Q8NGQ1 327 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 TMEM167AQ8TBQ9 72 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 C17orf77Q96MU5 243 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 TACC2O95359 2948 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 TMEM213A2RRL7 107 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 IGLV2-23P01705 113 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 TNFRSF1AP19438 455 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 CRIP1P50238 77 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 TIMM23BQ5SRD1 257 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 AMN1Q8IY45 258 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 OR4C13Q8NGP0 309 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 LINC00574Q9H8X3 128 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 DKK2Q9UBU2 259 aa8.2□□□□□ -1.1
CLIP4-208ENST00000456385 RAI1Q7Z5J4 1906 aaPredicted RBP8.2□□□□□ -1.1
CLIP4-208ENST00000456385 INTS1Q8N201 2190 aaKnown RBP8.2□□□□□ -1.1
CLIP4-208ENST00000456385 FXYD2P54710 66 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 C8orf46Q8TAG6 207 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 ZNF414Q96IQ9 312 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 RNF7Q9UBF6 113 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 TMSB15BA0A087X1C1 80 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 M0R1B8 84 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 SMIM17P0DL12 118 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 GCSHP23434 173 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 LYZP61626 148 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 OR4X2Q8NGF9 303 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 TNFRSF14Q92956 283 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 CLUHP3Q96NS8 147 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 TRGV9Q99603 122 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 PLCE1Q9P212 2302 aa8.19□□□□□ -1.1
CLIP4-208ENST00000456385 COL27A1Q8IZC6 1860 aaPredicted RBP8.19□□□□□ -1.1
CLIP4-208ENST00000456385 TNRC18O15417 2968 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-208ENST00000456385 IGHV3-72A0A0B4J1Y9 119 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 SMKR1H3BMG3 65 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 SIVA1O15304 175 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 CRYGCP07315 174 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 PSG3Q16557 428 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 MRGPRG-AS1Q2M3A8 158 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 ZNF788Q6ZQV5 615 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 C1orf162Q8NEQ5 155 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-208ENST00000456385 PRELID3AQ96N28 172 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 ZNF71Q9NQZ8 489 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-208ENST00000456385 OTORQ9NRC9 128 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 PPIAL4EA0A075B759 164 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 IGKV2D-26A0A0A0MRZ7 120 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 M0R296 226 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 SMIM13P0DJ93 91 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 PPIAL4FP0DN26 164 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 HOXB4P17483 251 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-208ENST00000456385 BCL6BQ8N143 479 aaPredicted RBP8.18□□□□□ -1.1
CLIP4-208ENST00000456385 OR10X1Q8NGY0 326 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 SLC25A15Q9Y619 301 aa8.18□□□□□ -1.1
CLIP4-208ENST00000456385 TM4SF5O14894 197 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 PAX8Q06710 450 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 C8orf49Q96NF6 230 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 COL25A1Q9BXS0 654 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-208ENST00000456385 SLC25A39Q9BZJ4 359 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-208ENST00000456385 HIGD1AQ9Y241 93 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 ZNF318Q5VUA4 2279 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 GPR179Q6PRD1 2367 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 ZDBF2Q9HCK1 2354 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 NDUFS7O75251 213 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 FCN3O75636 299 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 HBDP02042 147 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 TNFAIP6P98066 277 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-208ENST00000456385 Q5PR19 223 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 TMEM178AQ8NBL3 297 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 SIGMAR1Q99720 223 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 TSSC4Q9Y5U2 329 aaPredicted RBP8.17□□□□□ -1.1
CLIP4-208ENST00000456385 ADGRG4Q8IZF6 3080 aa8.17□□□□□ -1.1
CLIP4-208ENST00000456385 M0R3E3 92 aa8.16□□□□□ -1.1
CLIP4-208ENST00000456385 ENSAO43768 121 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms