RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 TIAM2Q8IVF5 1701 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 WDR90Q96KV7 1748 aa1.48□□□□□ -2.17
LINC02540-201ENST00000455554 COL1A1P02452 1464 aaPredicted RBP1.48□□□□□ -2.17
LINC02540-201ENST00000455554 MEGF6O75095 1541 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 MYLKQ15746 1914 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 MIA3Q5JRA6 1907 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 TRAV5A0A0B4J249 113 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IGKV1D-13A0A0B4J2D9 117 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 CCL15-CCL14A0A0B4J2E2 113 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 FAM236DA0A1B0GTK5 79 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 LOC107986453A0A1B0GWG9 222 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 GRIFINA4D1Z8 144 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 CEACAM18A8MTB9 384 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 H3BMG7 143 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 J3QRE1 110 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PLPP1O14494 284 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 MPDU1O75352 247 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PITX3O75364 302 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF324O75467 553 aaPredicted RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ARL6IP5O75915 188 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 WISP3O95389 354 aaPredicted RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 APOMO95445 188 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 NAPSAO96009 420 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IGHV3-23P01764 117 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IGHV3-7P01780 117 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IGHMP01871 453 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 GYPAP02724 150 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 MT-ND6P03923 174 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 CD3DP04234 171 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SMIM13P0DJ93 91 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IGKV1-13P0DP09 117 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 FAM236CP0DP71 79 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 COX8AP10176 69 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 BCL2P10415 239 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF708P17019 499 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 COX7A1P24310 79 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PRSS3P35030 304 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 OPRK1P41145 380 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 TNFSF9P41273 254 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ASIPP42127 132 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PSMB3P49720 205 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 DLX1P56177 255 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 KRTAP10-10P60014 251 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PPP1CAP62136 330 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 UBE2G1P62253 170 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SNRPFP62306 86 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RPL23P62829 140 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RPS24P62847 133 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SP4Q02446 784 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 CD164Q04900 197 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 EGFEM1PQ0D2K5 195 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 EIF3IQ13347 325 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 HES1Q14469 280 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 GUSBP1Q15486 140 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF791Q3KP31 576 aaPredicted RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 Q499Y3 187 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SPRNQ5BIV9 151 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 IBA57Q5T440 356 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RFLNAQ6ZTI6 216 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 C2orf91Q6ZV80 131 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 GOLT1AQ6ZVE7 132 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 FAM231DQ6ZW35 169 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF550Q7Z398 422 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SGPP2Q8IWX5 399 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 GAPTQ8N292 157 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 C3orf22Q8N5N4 141 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 NKAPP1Q8N9T2 125 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZFP62Q8NB50 900 aaPredicted RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 OR11H6Q8NGC7 330 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 OR4X2Q8NGF9 303 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 OR10J6PQ8NGY7 276 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SGMS2Q8NHU3 365 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 OTOSQ8NHW6 89 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF563Q8TA94 476 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RPS4Y2Q8TD47 263 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 C2orf15Q8WU43 125 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PPDPFLQ8WWR9 84 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 LSM10Q969L4 123 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 BORCS7Q96B45 105 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 PLEKHB2Q96CS7 222 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 LINC00526Q96FQ7 95 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 KCNS1Q96KK3 526 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 MCEEQ96PE7 176 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 KIR2DL4Q99706 377 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 FAM103A1Q9BTL3 118 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 SPANXDQ9BXN6 97 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 VSIRQ9H7M9 311 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF702PQ9H963 129 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RABAC1Q9UI14 185 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 TRMT112Q9UI30 125 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ZNF835Q9Y2P0 537 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 RREB1Q92766 1687 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 ANK1P16157 1881 aa1.47□□□□□ -2.17
LINC02540-201ENST00000455554 BRCA1P38398 1863 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 AHDC1Q5TGY3 1603 aaPredicted RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 COL14A1Q05707 1796 aaKnown RBP1.47□□□□□ -2.17
LINC02540-201ENST00000455554 NRAPQ86VF7 1730 aa1.46□□□□□ -2.18
LINC02540-201ENST00000455554 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.46□□□□□ -2.18
LINC02540-201ENST00000455554 NUP214P35658 2090 aaPredicted RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms