RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 IFNA7P01567 189 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 IFITM2Q01629 132 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 LEMD1Q68G75 181 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 SSX7Q7RTT5 188 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 RNF141Q8WVD5 230 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 GLMPQ8WWB7 406 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 RAB24Q969Q5 203 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 GRAMD2BQ96HH9 432 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 SLC25A2Q9BXI2 301 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 TMEM231Q9H6L2 316 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 TRAV5A0A0B4J249 113 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 IGHV3-66A0A0C4DH42 116 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 FAM213BQ8TBF2 198 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 MLXQ9UH92 298 aa12.56□□□□□ -0.4
CCDC90B-202ENST00000455220 NOTCH3Q9UM47 2321 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 MRPS12O15235 138 aaKnown RBP12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 TAS2R45P59539 299 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 GPR82Q96P67 336 aa12.55□□□□□ -0.4
CCDC90B-202ENST00000455220 EIF3GO75821 320 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 GP9P14770 177 aa12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 RPL7P18124 248 aaKnown RBP12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 KHDC3LQ587J8 217 aa12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 MBD3L1Q8WWY6 194 aa12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 UBQLN2Q9UHD9 624 aa12.54□□□□□ -0.4
CCDC90B-202ENST00000455220 CD33P20138 364 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 FAM90A2PQ658T7 463 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 PQLC2Q6ZP29 291 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 BPIFA4PQ86YQ2 179 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 STXBP6Q8NFX7 210 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 ZNF503Q96F45 646 aa12.53□□□□□ -0.4
CCDC90B-202ENST00000455220 MAP1LC3B2A6NCE7 125 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 ZNF705EA8MWA4 302 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 HMGB3O15347 200 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 SAP30O75446 220 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 CD5P06127 495 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 DEFB114Q30KQ6 69 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 SIGLEC15Q6ZMC9 328 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 ZNF767PQ75MW2 155 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 LRRC20Q8TCA0 184 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 DYNLRB2Q8TF09 96 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 MCRIP2Q9BUT9 160 aaKnown RBP12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 MAP1LC3BQ9GZQ8 125 aa12.52□□□□□ -0.4
CCDC90B-202ENST00000455220 HELTA6NFD8 242 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 IGLC2P0DOY2 106 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 INSL3P51460 131 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 LCN15Q6UWW0 184 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 TCF24Q7RTU0 167 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 OR51M1Q9H341 326 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 SMAD5-AS1Q9Y6J3 95 aa12.52□□□□□ -0.41
CCDC90B-202ENST00000455220 A0A087X0K7 114 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 OR7C2O60412 319 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 CXorf1O96002 111 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 IGLV1-51P01701 117 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 PYYP10082 97 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 GALR1P47211 349 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 BLOC1S1P78537 153 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 C9orf66Q5T8R8 295 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 C17orf77Q96MU5 243 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 PAXXQ9BUH6 204 aa12.51□□□□□ -0.41
CCDC90B-202ENST00000455220 CD300EQ496F6 205 aaPredicted RBP12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 PRR31Q5SQ13 230 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 OR2K2Q8NGT1 345 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 SUN5Q8TC36 379 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 FXYD5Q96DB9 178 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 HRH4Q9H3N8 390 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 PKD1L1Q8TDX9 2849 aa12.5□□□□□ -0.41
CCDC90B-202ENST00000455220 TRAV25A0A0B4J276 109 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 RGS13O14921 159 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 WIPF1O43516 503 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 HIST1H1EP10412 219 aaKnown RBP12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 GCHFRP30047 84 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 FGF8P55075 233 aaPredicted RBP12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 TMEM61Q8N0U2 210 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 LYPD6BQ8NI32 183 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 SELENOKQ9Y6D0 94 aa12.49□□□□□ -0.41
CCDC90B-202ENST00000455220 H3BQ15 152 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 TSPAN4O14817 238 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 OR10J4P0C629 311 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 ATF4P18848 351 aaPredicted RBP12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 MEOX2P50222 304 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 UBE2L3P68036 154 aaKnown RBP12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 ZNF586Q9NXT0 402 aa12.48□□□□□ -0.41
CCDC90B-202ENST00000455220 HBE1P02100 147 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 NMBP08949 121 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 IGLL1P15814 213 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 GUK1Q16774 197 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 TMEM167BQ9NRX6 74 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 TRBV19A0A075B6N1 114 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 ZNF785A8K8V0 405 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms