RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 COX7A2P2O60397 106 aa20.73■□□□□ 0.91
SMARCC1-203ENST00000454240 DEFB131AP59861 70 aa20.73■□□□□ 0.91
SMARCC1-203ENST00000454240 ZNF124Q15973 351 aa20.73■□□□□ 0.91
SMARCC1-203ENST00000454240 LINC00305Q7Z4B0 112 aa20.73■□□□□ 0.91
SMARCC1-203ENST00000454240 WFDC1Q9HC57 220 aa20.73■□□□□ 0.91
SMARCC1-203ENST00000454240 ZNF688P0C7X2 276 aa20.72■□□□□ 0.91
SMARCC1-203ENST00000454240 GALR1P47211 349 aa20.72■□□□□ 0.91
SMARCC1-203ENST00000454240 C10orf113Q5VZT2 155 aa20.72■□□□□ 0.91
SMARCC1-203ENST00000454240 C17orf77Q96MU5 243 aa20.72■□□□□ 0.91
SMARCC1-203ENST00000454240 RNF24Q9Y225 148 aa20.72■□□□□ 0.91
SMARCC1-203ENST00000454240 HUWE1Q7Z6Z7 4374 aaKnown RBP20.71■□□□□ 0.91
SMARCC1-203ENST00000454240 LOC102724200A0A096LPH7 203 aaPredicted RBP20.71■□□□□ 0.91
SMARCC1-203ENST00000454240 OR1L4Q8NGR5 311 aa20.71■□□□□ 0.91
SMARCC1-203ENST00000454240 TM2D3Q9BRN9 247 aa20.71■□□□□ 0.91
SMARCC1-203ENST00000454240 SOCS3O14543 225 aa20.7■□□□□ 0.9
SMARCC1-203ENST00000454240 RPL7P18124 248 aaKnown RBP20.7■□□□□ 0.9
SMARCC1-203ENST00000454240 PFDN5Q99471 154 aa20.7■□□□□ 0.9
SMARCC1-203ENST00000454240 RSG1Q9BU20 258 aa20.7■□□□□ 0.9
SMARCC1-203ENST00000454240 PARD6GQ9BYG4 376 aaPredicted RBP20.7■□□□□ 0.9
SMARCC1-203ENST00000454240 IFNA5P01569 189 aa20.69■□□□□ 0.9
SMARCC1-203ENST00000454240 Q6ZNX1 250 aa20.69■□□□□ 0.9
SMARCC1-203ENST00000454240 TNFSF18Q9UNG2 199 aa20.69■□□□□ 0.9
SMARCC1-203ENST00000454240 MEOX2P50222 304 aa20.68■□□□□ 0.9
SMARCC1-203ENST00000454240 SNRPD3P62318 126 aaKnown RBP20.68■□□□□ 0.9
SMARCC1-203ENST00000454240 MORN5Q5VZ52 161 aa20.68■□□□□ 0.9
SMARCC1-203ENST00000454240 ZNF709Q8N972 641 aa20.68■□□□□ 0.9
SMARCC1-203ENST00000454240 GATAD1Q8WUU5 269 aa20.68■□□□□ 0.9
SMARCC1-203ENST00000454240 FXYD6-FXYD2A0A087WZ82 144 aa20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 MRPS12O15235 138 aaKnown RBP20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 PSMG4Q5JS54 123 aa20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 INO80EQ8NBZ0 244 aaPredicted RBP20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 SCGB1C1Q8TD33 95 aa20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 KCNIP2Q9NS61 270 aa20.67■□□□□ 0.9
SMARCC1-203ENST00000454240 AGRNO00468 2067 aa20.66■□□□□ 0.9
SMARCC1-203ENST00000454240 RNF222A6NCQ9 220 aa20.66■□□□□ 0.9
SMARCC1-203ENST00000454240 C17orf112F2Z3M2 114 aa20.66■□□□□ 0.9
SMARCC1-203ENST00000454240 SAMD13Q5VXD3 122 aa20.66■□□□□ 0.9
SMARCC1-203ENST00000454240 ISLRO14498 428 aa20.65■□□□□ 0.9
SMARCC1-203ENST00000454240 ID1P41134 155 aa20.65■□□□□ 0.9
SMARCC1-203ENST00000454240 PSMB3P49720 205 aa20.65■□□□□ 0.9
SMARCC1-203ENST00000454240 ZMAT4Q9H898 229 aa20.65■□□□□ 0.9
SMARCC1-203ENST00000454240 A0A087X0K7 114 aa20.64■□□□□ 0.89
SMARCC1-203ENST00000454240 ATF4P18848 351 aaPredicted RBP20.64■□□□□ 0.89
SMARCC1-203ENST00000454240 GCSAMLQ5JQS6 135 aa20.64■□□□□ 0.89
SMARCC1-203ENST00000454240 KIR2DL5BA0A0G2JN68 375 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 KIR2DL5BA0A0G2JPC4 375 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 SMLR1H3BR10 107 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 RPL35AP18077 110 aaKnown RBP20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 BPIFA4PQ86YQ2 179 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 KIR2DL5AQ8N109 375 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 KIR2DL5BQ8NHK3 375 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 C16orf92Q96LL3 132 aa20.63■□□□□ 0.89
SMARCC1-203ENST00000454240 TRAV5A0A0B4J249 113 aa20.62■□□□□ 0.89
SMARCC1-203ENST00000454240 APOC4P55056 127 aa20.62■□□□□ 0.89
SMARCC1-203ENST00000454240 ZNF266Q14584 549 aa20.62■□□□□ 0.89
SMARCC1-203ENST00000454240 SPATA25Q9BR10 227 aa20.62■□□□□ 0.89
SMARCC1-203ENST00000454240 U3KQK5 164 aa20.62■□□□□ 0.89
SMARCC1-203ENST00000454240 KNCNA6PVL3 124 aa20.61■□□□□ 0.89
SMARCC1-203ENST00000454240 STHQ8IWL8 128 aa20.61■□□□□ 0.89
SMARCC1-203ENST00000454240 LINC00052Q96N35 136 aa20.61■□□□□ 0.89
SMARCC1-203ENST00000454240 FAM78BQ5VT40 261 aa20.6■□□□□ 0.89
SMARCC1-203ENST00000454240 ACTL10Q5JWF8 245 aa20.59■□□□□ 0.89
SMARCC1-203ENST00000454240 TRPT1Q86TN4 253 aaKnown RBP20.59■□□□□ 0.89
SMARCC1-203ENST00000454240 RCHY1Q96PM5 261 aa20.59■□□□□ 0.89
SMARCC1-203ENST00000454240 TIMM9Q9Y5J7 89 aa20.59■□□□□ 0.89
SMARCC1-203ENST00000454240 RFNGQ9Y644 331 aa20.59■□□□□ 0.89
SMARCC1-203ENST00000454240 NBEAL2Q6ZNJ1 2754 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 TRAV8-2A0A0B4J237 113 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 UBE2CO00762 179 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 ARPC5O15511 151 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 IGLC2P0DOY2 106 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 FFAR4Q5NUL3 377 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 C20orf173Q96LM9 149 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 CSTL1Q9H114 145 aa20.58■□□□□ 0.89
SMARCC1-203ENST00000454240 TENM3Q9P273 2699 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 CXCL2P19875 107 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 SPATA31B1PQ5VZV4 182 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 Q6ZWC4 215 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 OR11H4Q8NGC9 324 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 ST6GAL2Q96JF0 529 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 MRPL32Q9BYC8 188 aaKnown RBP20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 HRH4Q9H3N8 390 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 RETNQ9HD89 108 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 TMEM14CQ9P0S9 112 aa20.56■□□□□ 0.88
SMARCC1-203ENST00000454240 H3BMM0 161 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 H3BQ15 152 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 DEFB1P60022 68 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 IGFL4Q6B9Z1 124 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 LCN15Q6UWW0 184 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 FOXI2Q6ZQN5 318 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 MIR17HGQ75NE6 70 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 FAM167A-AS1Q96KT0 104 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 MFFQ9GZY8 342 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 SAV1Q9H4B6 383 aaPredicted RBP20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 RPRMQ9NS64 109 aa20.55■□□□□ 0.88
SMARCC1-203ENST00000454240 HMSDA8MTL9 139 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 SNRPCP09234 159 aaKnown RBP20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 HLA-DRB4P13762 266 aa20.54■□□□□ 0.88
SMARCC1-203ENST00000454240 GDF5OSQ5U4N7 250 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms