RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 H3BQ15 152 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 AGRNO00468 2067 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 TCF21O43680 179 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 BUB3O43684 328 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 NDUFB4O95168 129 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 APOHP02749 345 aaPredicted RBP4.59□□□□□ -1.67
SDC4P-201ENST00000453285 NBEAP1P0C6P0 100 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 SFTA3P0C7M3 94 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 IGLC2P0DOY2 106 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 HIST1H1EP10412 219 aaKnown RBP4.59□□□□□ -1.67
SDC4P-201ENST00000453285 CRYBB3P26998 211 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 MYCNOSP40205 109 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 PROK1P58294 105 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 UBE2G2P60604 165 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 UBE2L3P68036 154 aaKnown RBP4.59□□□□□ -1.67
SDC4P-201ENST00000453285 SRSF2Q01130 221 aaKnown RBP4.59□□□□□ -1.67
SDC4P-201ENST00000453285 MEF2BQ02080 365 aaPredicted RBP4.59□□□□□ -1.67
SDC4P-201ENST00000453285 JMJD1CQ15652 2540 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 FAM90A2PQ658T7 463 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 HIST2H2BDQ6DRA6 164 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 GPHB5Q86YW7 130 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 CYB561D1Q8N8Q1 229 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 STXBP6Q8NFX7 210 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 WFDC12Q8WWY7 111 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 TMEM190Q8WZ59 177 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 TXNDC17Q9BRA2 123 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 SEC11CQ9BY50 192 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 ZNF586Q9NXT0 402 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 SMAD5-AS1Q9Y6J3 95 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 ARL2-SNX15V9GYD0 113 aa4.59□□□□□ -1.67
SDC4P-201ENST00000453285 NIPBLQ6KC79 2804 aaeCLIP4.59□□□□□ -1.68
SDC4P-201ENST00000453285 GGTLC3B5MD39 225 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 C11orf94C9JXX5 98 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 F8W036 122 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 TMEM250H0YL14 139 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 K7EMT4 169 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF207O43670 478 aaKnown RBP4.58□□□□□ -1.68
SDC4P-201ENST00000453285 SNRPCP09234 159 aaKnown RBP4.58□□□□□ -1.68
SDC4P-201ENST00000453285 CD28P10747 220 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 KRTAP10-3P60369 221 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 SUMO1P63165 101 aaKnown RBP4.58□□□□□ -1.68
SDC4P-201ENST00000453285 GUCA2BQ16661 112 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 CST9LP1Q5W188 147 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 C16orf54Q6UWD8 224 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 S100A7AQ86SG5 101 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 BPIFA4PQ86YQ2 179 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 OR4F5Q8NH21 305 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 C4orf3Q8WVX3 66 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 NARS2Q96I59 477 aaKnown RBP4.58□□□□□ -1.68
SDC4P-201ENST00000453285 OR4F4Q96R69 305 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 METTL26Q96S19 204 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 ELOVL1Q9BW60 279 aa4.58□□□□□ -1.68
SDC4P-201ENST00000453285 TRBV19A0A075B6N1 114 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 IGHV3OR16-13A0A075B7E8 117 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 IGHV3-49A0A0A0MS15 119 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 IGHV3-74A0A0B4J1X5 117 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 IGHV3-66A0A0C4DH42 116 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 SCO2A0A1W2PP80 73 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 F6UZH7 168 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 H3BTX0 84 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 LGALS9O00182 355 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 PDE6DO43924 150 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 APOC3P02656 99 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 RPL7P18124 248 aaKnown RBP4.57□□□□□ -1.68
SDC4P-201ENST00000453285 EDN2P20800 178 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 KLF5Q13887 457 aaPredicted RBP4.57□□□□□ -1.68
SDC4P-201ENST00000453285 FAM106AQ4KMX7 169 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 TM4SF20Q53R12 229 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 SOHLH1Q5JUK2 328 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 C1orf194Q5T5A4 169 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 ATRAIDQ6UW56 229 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 REC114Q7Z4M0 266 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 OR8I2Q8N0Y5 310 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 GLMPQ8WWB7 406 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 C11orf52Q96A22 123 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 C20orf24Q9BUV8 137 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 RNF24Q9Y225 148 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 RNF114Q9Y508 228 aa4.57□□□□□ -1.68
SDC4P-201ENST00000453285 A0A087X0K7 114 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 IGHV7-4-1A0A0J9YVY3 117 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 ZNF320A2RRD8 509 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 TMEM213A2RRL7 107 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 PGPA6NDG6 321 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 ADARB2-AS1A8MUL3 147 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 A8MWP6 167 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 LINC01619G3V211 115 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 SLC17A3O00476 420 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 CHEK1O14757 476 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 S100A7P31151 101 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 HOXD3P31249 432 aaPredicted RBP4.56□□□□□ -1.68
SDC4P-201ENST00000453285 CEBPGP53567 150 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 SLURP1P55000 103 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 RANP62826 216 aaKnown RBP4.56□□□□□ -1.68
SDC4P-201ENST00000453285 PDE6HQ13956 83 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 RPEL1Q2QD12 228 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 DEFB136Q30KP8 78 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 SIGLEC15Q6ZMC9 328 aa4.56□□□□□ -1.68
SDC4P-201ENST00000453285 ADAMTSL5Q6ZMM2 481 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms