RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ORM2P19652 201 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 TAS2R45P59539 299 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 TCTEX1D4Q5JR98 221 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 HSPB9Q9BQS6 159 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
COL27A1-202ENST00000451716 PSG8Q9UQ74 426 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 ZFHX3Q15911 3703 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 TCRBV4S1A1TA0A5B7 111 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 ACTL10Q5JWF8 245 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 C10orf113Q5VZT2 155 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 PPP1R27Q86WC6 154 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 MMD2Q8IY49 270 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 TEX45Q8NA69 505 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 NHLRC2Q8NBF2 726 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 MRAP2Q96G30 205 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 RAB1BQ9H0U4 201 aa9.64□□□□□ -0.87
COL27A1-202ENST00000451716 A0A1W2PPR1 153 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 OR11H12B2RN74 326 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 NDUFS7O75251 213 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 CRYGBP07316 175 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 FRMD6-AS1P0C7T7 363 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 GNG4P50150 75 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 PSG9Q00887 426 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 PLGLAQ15195 96 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 OR11H1Q8NG94 326 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 OR11H2Q8NH07 326 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 CDC42EP3Q9UKI2 254 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 TIMM23O14925 209 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 CMTM2Q8TAZ6 248 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 IMMP2LQ96T52 175 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 RNASE7Q9H1E1 156 aaKnown RBP9.63□□□□□ -0.87
COL27A1-202ENST00000451716 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
COL27A1-202ENST00000451716 ACACBO00763 2458 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 TYMSP04818 313 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 FXYD3Q14802 87 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 LINC00305Q7Z4B0 112 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 C19orf24Q9BVV8 132 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 TRAPPC1Q9Y5R8 145 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 CSMD2Q7Z408 3487 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 SPINK4O60575 86 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 RPL32P62910 135 aaKnown RBP9.62□□□□□ -0.87
COL27A1-202ENST00000451716 FOXL1Q12952 345 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 CFAP46Q8IYW2 2715 aa9.62□□□□□ -0.87
COL27A1-202ENST00000451716 TEX22C9J3V5 150 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 IGLC1P0CG04 106 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 LCN2P80188 198 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 FAM103A1Q9BTL3 118 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 PAXXQ9BUH6 204 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 PKD1L2Q7Z442 2459 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 CELSR1Q9NYQ6 3014 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 C9JCJ5 164 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 H3BTX0 84 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 SNAI2O43623 268 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 MGST1P10620 155 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 TPPP2P59282 170 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 BLNKQ8WV28 456 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 SGK494Q96LW2 274 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 MRPL32Q9BYC8 188 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 LY6LH3BQJ8 138 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 CBLN1P23435 193 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 SLC35B1P78383 322 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 C11orf71Q6IPW1 123 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 SRSF12Q8WXF0 261 aaKnown RBP9.61□□□□□ -0.87
COL27A1-202ENST00000451716 TIMD4Q96H15 378 aa9.61□□□□□ -0.87
COL27A1-202ENST00000451716 FLNCQ14315 2725 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 A0A1W2PRE2 83 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 FSTL3O95633 263 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 TCL1AP56279 114 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 MTURNQ8N3F0 131 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 LY6G5BQ8NDX9 201 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 C8orf46Q8TAG6 207 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 VCX2Q9H322 139 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 DIRC3C9JPN6 131 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 M0QXV9 152 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 KRTDAPP60985 99 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 GNG5P63218 68 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 COX19Q49B96 90 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 GTF2H5Q6ZYL4 71 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 KLHDC1Q8N7A1 406 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 OR1L4Q8NGR5 311 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 SSBP3Q9BWW4 388 aaPredicted RBP9.6□□□□□ -0.87
COL27A1-202ENST00000451716 IL36BQ9NZH7 164 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 UFC1Q9Y3C8 167 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 V9GYV3 84 aa9.6□□□□□ -0.87
COL27A1-202ENST00000451716 HTR1DP28221 377 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 TIGITQ495A1 244 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 AMMECR1Q9Y4X0 333 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-202ENST00000451716 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
COL27A1-202ENST00000451716 GRIFINA4D1Z8 144 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 GAGE10A6NGK3 116 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
COL27A1-202ENST00000451716 IGLV2-8P01709 118 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 UQCRFS1P47985 274 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 HSD52Q0P140 79 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 HES1Q14469 280 aa9.59□□□□□ -0.87
COL27A1-202ENST00000451716 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms