RNA–Protein interactions for RNA: ENST00000449971.5

FAM3A-216, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-216ENST00000449971 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 MEOX2P50222 304 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 CAV2P51636 162 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 TEPPQ6URK8 271 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 C11orf45Q8TAV5 145 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 GPR82Q96P67 336 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 SCRT1Q9BWW7 348 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 C11orf68Q9H3H3 251 aaKnown RBP12.72□□□□□ -0.37
FAM3A-216ENST00000449971 XCL2Q9UBD3 114 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
FAM3A-216ENST00000449971 PVALBP20472 110 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-216ENST00000449971 NANOS2P60321 138 aaKnown RBP12.71□□□□□ -0.37
FAM3A-216ENST00000449971 S100A10P60903 97 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 SLC38A11Q08AI6 406 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 GDF5OSQ5U4N7 250 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 SAMD13Q5VXD3 122 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 GGACTQ9BVM4 153 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 C1QTNF4Q9BXJ3 329 aa12.71□□□□□ -0.37
FAM3A-216ENST00000449971 SLC25A39Q9BZJ4 359 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-216ENST00000449971 SAV1Q9H4B6 383 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-216ENST00000449971 GPN1Q9HCN4 374 aaPredicted RBP12.71□□□□□ -0.37
FAM3A-216ENST00000449971 AGRNO00468 2067 aa12.71□□□□□ -0.38
FAM3A-216ENST00000449971 IGHV4-28A0A0C4DH34 117 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 FAM24AA6NFZ4 105 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 H3BRN7 92 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 GOSR2O14653 212 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 CST7O76096 145 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 PLP1P60201 277 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 IFITM3Q01628 133 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 FGL1Q08830 312 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 EBLN2Q6P2I7 272 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 CSNK1G2-AS1Q8NCQ2 148 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 OR4B1Q8NGF8 309 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 SHANK2-AS3Q9BTD1 123 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 MFFQ9GZY8 342 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 ARL6Q9H0F7 186 aa12.7□□□□□ -0.38
FAM3A-216ENST00000449971 ZNF705EA8MWA4 302 aaPredicted RBP12.69□□□□□ -0.38
FAM3A-216ENST00000449971 MIFP14174 115 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 FXYD7P58549 80 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 S100A7AQ86SG5 101 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 Q8NAQ8 132 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 C20orf173Q96LM9 149 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 C17orf77Q96MU5 243 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 UHRF2Q96PU4 802 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 RPRMQ9NS64 109 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 X6R8D5 127 aa12.69□□□□□ -0.38
FAM3A-216ENST00000449971 F6UB75 175 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 AGPAT2O15120 278 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 RBMY1A1P0DJD3 496 aaKnown RBP12.68□□□□□ -0.38
FAM3A-216ENST00000449971 RBMY1CP0DJD4 496 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 IL15RAQ13261 267 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 RAB32Q13637 225 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
FAM3A-216ENST00000449971 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 PATE2Q6UY27 113 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 C11orf1Q9H5F2 150 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
FAM3A-216ENST00000449971 RPL7P18124 248 aaKnown RBP12.67□□□□□ -0.38
FAM3A-216ENST00000449971 PXDC1Q5TGL8 231 aa12.67□□□□□ -0.38
FAM3A-216ENST00000449971 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
FAM3A-216ENST00000449971 IGFL4Q6B9Z1 124 aa12.67□□□□□ -0.38
FAM3A-216ENST00000449971 NRARPQ7Z6K4 114 aa12.67□□□□□ -0.38
FAM3A-216ENST00000449971 ARV1Q9H2C2 271 aa12.67□□□□□ -0.38
FAM3A-216ENST00000449971 A0A0J9YX75 114 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 INMT-MINDY4F8WBC2 141 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 SIX6O95475 246 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 PSG9Q00887 426 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 RAB31Q13636 194 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 CLUHP3Q96NS8 147 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 MGST2Q99735 147 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 UQCC1Q9NVA1 299 aa12.66□□□□□ -0.38
FAM3A-216ENST00000449971 FAT2Q9NYQ8 4349 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 DNAH2Q9P225 4427 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 IGSF23A1L1A6 192 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 COX7A2P2O60397 106 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 CAMLGP49069 296 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 SULT1A1P50225 295 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 RNF182Q8N6D2 247 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 TMEM252Q8N6L7 170 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 LRRC20Q8TCA0 184 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 C2CD4CQ8TF44 421 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 SLC35B3Q9H1N7 401 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 LYRM2Q9NU23 88 aaPredicted RBP12.65□□□□□ -0.38
FAM3A-216ENST00000449971 RNF24Q9Y225 148 aa12.65□□□□□ -0.38
FAM3A-216ENST00000449971 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
FAM3A-216ENST00000449971 TRAV8-2A0A0B4J237 113 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 IGLL5B9A064 214 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 PRAF2O60831 178 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 S100A11P31949 105 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 DEFA1P59665 94 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 DEFA3P59666 94 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 LINC00305Q7Z4B0 112 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 STX12Q86Y82 276 aa12.64□□□□□ -0.39
FAM3A-216ENST00000449971 MUC4Q99102 2169 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 RLN2P04090 185 aa12.63□□□□□ -0.39
FAM3A-216ENST00000449971 HBG1P69891 147 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms