RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 FGL1Q08830 312 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 FAM78BQ5VT40 261 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 Q6ZTC4 211 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 NEU1Q99519 415 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 CCDC32Q9BV29 185 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 SCRT1Q9BWW7 348 aa11.02□□□□□ -0.65
CHD3-205ENST00000449744 SLC25A39Q9BZJ4 359 aaPredicted RBP11.02□□□□□ -0.65
CHD3-205ENST00000449744 RCL1Q9Y2P8 373 aaKnown RBP11.02□□□□□ -0.65
CHD3-205ENST00000449744 A0A0J9YX75 114 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 SMIM9A6NGZ8 99 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 CCSO14618 274 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 MBPP02686 304 aaPredicted RBP11.01□□□□□ -0.65
CHD3-205ENST00000449744 RPL7P18124 248 aaKnown RBP11.01□□□□□ -0.65
CHD3-205ENST00000449744 TEPPQ6URK8 271 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
CHD3-205ENST00000449744 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
CHD3-205ENST00000449744 C20orf173Q96LM9 149 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 SHANK2-AS3Q9BTD1 123 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 SLC35B3Q9H1N7 401 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 NUDT15Q9NV35 164 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
CHD3-205ENST00000449744 C7orf66A4D0T2 115 aa11□□□□□ -0.65
CHD3-205ENST00000449744 TMEM189A5PLL7 270 aa11□□□□□ -0.65
CHD3-205ENST00000449744 C5orf51A6NDU8 294 aa11□□□□□ -0.65
CHD3-205ENST00000449744 ZNF705FA8MVS1 300 aaPredicted RBP11□□□□□ -0.65
CHD3-205ENST00000449744 DEDDO75618 318 aa11□□□□□ -0.65
CHD3-205ENST00000449744 ZNF705DP0CH99 300 aaPredicted RBP11□□□□□ -0.65
CHD3-205ENST00000449744 ZNF705BP0CI00 300 aaPredicted RBP11□□□□□ -0.65
CHD3-205ENST00000449744 BCAP31P51572 246 aa11□□□□□ -0.65
CHD3-205ENST00000449744 PLP1P60201 277 aa11□□□□□ -0.65
CHD3-205ENST00000449744 SLC38A11Q08AI6 406 aa11□□□□□ -0.65
CHD3-205ENST00000449744 ZNF709Q8N972 641 aa11□□□□□ -0.65
CHD3-205ENST00000449744 SEC22CQ9BRL7 303 aa11□□□□□ -0.65
CHD3-205ENST00000449744 ARL6Q9H0F7 186 aa11□□□□□ -0.65
CHD3-205ENST00000449744 APLNQ9ULZ1 77 aa11□□□□□ -0.65
CHD3-205ENST00000449744 CELA1Q9UNI1 258 aa11□□□□□ -0.65
CHD3-205ENST00000449744 RNF24Q9Y225 148 aa11□□□□□ -0.65
CHD3-205ENST00000449744 LSM5Q9Y4Y9 91 aaKnown RBP11□□□□□ -0.65
CHD3-205ENST00000449744 GOSR2O14653 212 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 DUSP14O95147 198 aaKnown RBP10.99□□□□□ -0.65
CHD3-205ENST00000449744 H2AFB2P0C5Z0 115 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 SPART-AS1P0CW21 52 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 EMP1P54849 157 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 C12orf74Q32Q52 190 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 ZNF767PQ75MW2 155 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 ZNF546Q86UE3 836 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 C12orf45Q8N5I9 185 aaPredicted RBP10.99□□□□□ -0.65
CHD3-205ENST00000449744 RPP25LQ8N5L8 163 aaKnown RBP10.99□□□□□ -0.65
CHD3-205ENST00000449744 C17orf77Q96MU5 243 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 UHRF2Q96PU4 802 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 GGACTQ9BVM4 153 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 RFNGQ9Y644 331 aa10.99□□□□□ -0.65
CHD3-205ENST00000449744 DEFB131BA0A096LNP1 70 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 FAM240BA0A1B0GVZ2 78 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 A6NHS1 94 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 K7EPK0 472 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 HBE1P02100 147 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 PVALBP20472 110 aaPredicted RBP10.98□□□□□ -0.65
CHD3-205ENST00000449744 ARL16Q0P5N6 197 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 PXDC1Q5TGL8 231 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 LRRC20Q8TCA0 184 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 ARV1Q9H2C2 271 aa10.98□□□□□ -0.65
CHD3-205ENST00000449744 IGHV4-4A0A075B6R2 117 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 AGPAT2O15120 278 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 AMBPP02760 352 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 CAV2P51636 162 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 MZT2BQ6NZ67 158 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 LINC00299Q6ZSB3 139 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 RNF182Q8N6D2 247 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 ZNF738Q8NE65 137 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 S100ZQ8WXG8 99 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 C2orf50Q96LR7 162 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 TMEM208Q9BTX3 173 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 RNF126Q9BV68 326 aa10.97□□□□□ -0.65
CHD3-205ENST00000449744 TRAV8-2A0A0B4J237 113 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 TEX48A0A1B0GUV7 120 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 CNN1P51911 297 aaKnown RBP10.96□□□□□ -0.65
CHD3-205ENST00000449744 RAB31Q13636 194 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 RRN3P1Q2M238 152 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 C1orf158Q8N1D5 194 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 IGF2BP2-AS1Q96M15 143 aa10.96□□□□□ -0.65
CHD3-205ENST00000449744 A0A087X0K7 114 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 LOC102723971A0A1B0GUV8 181 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 A8MTW9 85 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 COX7A2P2O60397 106 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 S100A10P60903 97 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 PATE2Q6UY27 113 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 LINC00305Q7Z4B0 112 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 PPP1R14DQ9NXH3 145 aa10.95□□□□□ -0.66
CHD3-205ENST00000449744 CST7O76096 145 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 CXCL3P19876 107 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 CAMLGP49069 296 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 RHOBP62745 196 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 PSG3Q16557 428 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 SPINK13Q1W4C9 94 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 AMTNQ6UX39 209 aa10.94□□□□□ -0.66
CHD3-205ENST00000449744 Q6ZRG5 221 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms