RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 MLXQ9UH92 298 aa11.08□□□□□ -0.64
SHANK2-210ENST00000449116 TRAV5A0A0B4J249 113 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 RPL7P18124 248 aaKnown RBP11.07□□□□□ -0.64
SHANK2-210ENST00000449116 SULT1A2P50226 295 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 INSL3P51460 131 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 TAS2R45P59539 299 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 PRR31Q5SQ13 230 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 C9orf66Q5T8R8 295 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 TEX261Q6UWH6 196 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 GPR82Q96P67 336 aa11.07□□□□□ -0.64
SHANK2-210ENST00000449116 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 HELTA6NFD8 242 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 CD5P06127 495 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 KHDC3LQ587J8 217 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 SIGLEC15Q6ZMC9 328 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 BPIFA4PQ86YQ2 179 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 RAB24Q969Q5 203 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 SLC25A2Q9BXI2 301 aa11.06□□□□□ -0.64
SHANK2-210ENST00000449116 EIF3GO75821 320 aaKnown RBP eCLIP11.05□□□□□ -0.64
SHANK2-210ENST00000449116 IGLV1-51P01701 117 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 IGLL1P15814 213 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 GALR1P47211 349 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 FHITP49789 147 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 ZNF726P1Q15940 193 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 CD300EQ496F6 205 aaPredicted RBP11.05□□□□□ -0.64
SHANK2-210ENST00000449116 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 STXBP6Q8NFX7 210 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 OR2K2Q8NGT1 345 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 RNF141Q8WVD5 230 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 FAM167A-AS1Q96KT0 104 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 GPR61Q9BZJ8 451 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 SELENOKQ9Y6D0 94 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 CMYA5Q8N3K9 4069 aa11.05□□□□□ -0.64
SHANK2-210ENST00000449116 MRPS12O15235 138 aaKnown RBP11.04□□□□□ -0.64
SHANK2-210ENST00000449116 HMGB3O15347 200 aaKnown RBP11.04□□□□□ -0.64
SHANK2-210ENST00000449116 OR7C2O60412 319 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 IFNA7P01567 189 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 PQLC2Q6ZP29 291 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 RBPMS2Q6ZRY4 209 aaKnown RBP11.04□□□□□ -0.64
SHANK2-210ENST00000449116 SSX7Q7RTT5 188 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 ZNF680Q8NEM1 530 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 OR51M1Q9H341 326 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 VWFP04275 2813 aa11.04□□□□□ -0.64
SHANK2-210ENST00000449116 TRAV25A0A0B4J276 109 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 MAP1LC3B2A6NCE7 125 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 GP9P14770 177 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 ATF4P18848 351 aaPredicted RBP11.03□□□□□ -0.64
SHANK2-210ENST00000449116 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
SHANK2-210ENST00000449116 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 TMEM61Q8N0U2 210 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 PAXXQ9BUH6 204 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 MAP1LC3BQ9GZQ8 125 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 SMAD5-AS1Q9Y6J3 95 aa11.03□□□□□ -0.64
SHANK2-210ENST00000449116 ZNF785A8K8V0 405 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF705EA8MWA4 302 aaPredicted RBP11.02□□□□□ -0.65
SHANK2-210ENST00000449116 TSPAN4O14817 238 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 WIPF1O43516 503 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 H2AFB1P0C5Y9 115 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 ARL14EPLP0DKL9 152 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 IGLC2P0DOY2 106 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 PYYP10082 97 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 MBD3L1Q8WWY6 194 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF503Q96F45 646 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 HRH4Q9H3N8 390 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 UBQLN2Q9UHD9 624 aa11.02□□□□□ -0.65
SHANK2-210ENST00000449116 IGKV3-7A0A075B6H7 116 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 A0A087X0K7 114 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 CXorf1O96002 111 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
SHANK2-210ENST00000449116 MEOX2P50222 304 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 UBE2L3P68036 154 aaKnown RBP11.01□□□□□ -0.65
SHANK2-210ENST00000449116 PAFAH1B2P68402 229 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 LRRC20Q8TCA0 184 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 SFT2D1Q8WV19 159 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 FXYD5Q96DB9 178 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 NRN1Q9NPD7 142 aa11.01□□□□□ -0.65
SHANK2-210ENST00000449116 IZUMO1RA6ND01 250 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 H3BQ15 152 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 OR10J4P0C629 311 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 FGF8P55075 233 aaPredicted RBP11□□□□□ -0.65
SHANK2-210ENST00000449116 BLOC1S1P78537 153 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 IFITM2Q01629 132 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 GUK1Q16774 197 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 GBGT1Q8N5D6 347 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 SAT2Q96F10 170 aaPredicted RBP11□□□□□ -0.65
SHANK2-210ENST00000449116 C17orf77Q96MU5 243 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 SPAG8Q99932 426 aaPredicted RBP11□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF586Q9NXT0 402 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 NOTCH3Q9UM47 2321 aa11□□□□□ -0.65
SHANK2-210ENST00000449116 TRAV2A0A0B4J234 112 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms