RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 ARV1Q9H2C2 271 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 PLA2G2EQ9NZK7 142 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 BIRC6Q9NR09 4857 aa10.24□□□□□ -0.77
PDLIM2-213ENST00000448520 OR5G3P0C626 314 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 C8orf88P0DMB2 117 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 SELENOTP62341 195 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 MORN5Q5VZ52 161 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 RBPMS2Q6ZRY4 209 aaKnown RBP10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 UHRF2Q96PU4 802 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 OVOL2Q9BRP0 275 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 SLC25A32Q9H2D1 315 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 VSIRQ9H7M9 311 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 MRPL27Q9P0M9 148 aaKnown RBP10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 MLXQ9UH92 298 aa10.23□□□□□ -0.77
PDLIM2-213ENST00000448520 C17orf112F2Z3M2 114 aa10.22□□□□□ -0.77
PDLIM2-213ENST00000448520 RAB2AP61019 212 aa10.22□□□□□ -0.77
PDLIM2-213ENST00000448520 TMEM37Q8WXS4 190 aa10.22□□□□□ -0.77
PDLIM2-213ENST00000448520 SCRT1Q9BWW7 348 aa10.22□□□□□ -0.77
PDLIM2-213ENST00000448520 UFC1Q9Y3C8 167 aa10.22□□□□□ -0.77
PDLIM2-213ENST00000448520 PLP1P60201 277 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 SPATA31B1PQ5VZV4 182 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 LEMD1Q68G75 181 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 WFDC3Q8IUB2 231 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 OR2G3Q8NGZ4 309 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 TMED6Q8WW62 240 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 ST8SIA2Q92186 375 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 METTL26Q96S19 204 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 PSMG3Q9BT73 122 aaPredicted RBP10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 DAZ1Q9NQZ3 744 aaKnown RBP10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 RABAC1Q9UI14 185 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 TIMM9Q9Y5J7 89 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 HYDINQ4G0P3 5121 aa10.21□□□□□ -0.77
PDLIM2-213ENST00000448520 TRAV5A0A0B4J249 113 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 IGHV7-4-1A0A0J9YVY3 117 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 K7EMT4 169 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 UBE2CO00762 179 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 COX7A2P2O60397 106 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 HYPMO75409 117 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 CFDP00746 253 aaPredicted RBP10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 SPP1P10451 314 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 TPT1P13693 172 aaKnown RBP10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 NPPCP23582 126 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 Q6ZWC4 215 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 SLC51BQ86UW2 128 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 BAP18Q8IXM2 172 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 STOML3Q8TAV4 291 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 SMPXQ9UHP9 88 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 HIGD1AQ9Y241 93 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 TP53TG1Q9Y2A0 90 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 U3KQE9 123 aa10.2□□□□□ -0.78
PDLIM2-213ENST00000448520 H3BRN7 92 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 CRYBB3P26998 211 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 BMI1P35226 326 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 APOC4P55056 127 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 C10orf113Q5VZT2 155 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 FAM122CQ6P4D5 195 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 Q6ZRG5 221 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 MIR17HGQ75NE6 70 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 PPP1R14BQ96C90 147 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 GNPNAT1Q96EK6 184 aaPredicted RBP10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 SPAG8Q99932 426 aaPredicted RBP10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 RHPN1-AS1Q9BWJ2 59 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 SLC25A39Q9BZJ4 359 aaPredicted RBP10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 KCNIP2Q9NS61 270 aa10.19□□□□□ -0.78
PDLIM2-213ENST00000448520 CHEK1O14757 476 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 TSPAN4O14817 238 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 ATF4P18848 351 aaPredicted RBP10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 FAM74A1Q5RGS3 127 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 SHANK2-AS3Q9BTD1 123 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 SLC25A22Q9H936 323 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 SEPSECSQ9HD40 501 aaKnown RBP10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 PLECQ15149 4684 aaKnown RBP10.18□□□□□ -0.78
PDLIM2-213ENST00000448520 KIR2DL5BA0A0G2JN68 375 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 KIR2DL5BA0A0G2JPC4 375 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 CXorf65A6NEN9 183 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 NUPR2A6NF83 97 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 ZNF98A6NK75 572 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 HMGB3O15347 200 aaKnown RBP10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 SPRY2O43597 315 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 BUB3O43684 328 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 SNRPCP09234 159 aaKnown RBP10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 C4BPBP20851 252 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 FHITP49789 147 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 EIF5AP63241 154 aaKnown RBP10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 ACOT6Q3I5F7 207 aaPredicted RBP10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 PXDC1Q5TGL8 231 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 FAM78BQ5VT40 261 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 ALKAL2Q6UX46 152 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 SSX7Q7RTT5 188 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 KIR2DL5AQ8N109 375 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 OR10G4Q8NGN3 311 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 OR10G9Q8NGN4 311 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 OR10G7Q8NGN6 311 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 OR1L4Q8NGR5 311 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 KIR2DL5BQ8NHK3 375 aa10.17□□□□□ -0.78
PDLIM2-213ENST00000448520 LINC00476Q8WZB0 136 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms