RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 METTL15P1P0C7V9 234 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 MEOX2P50222 304 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 PLP1P60201 277 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 RRAS2P62070 204 aaPredicted RBP14.86□□□□□ -0.03
SDC1-205ENST00000447124 ARL16Q0P5N6 197 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 SLC25A39Q9BZJ4 359 aaPredicted RBP14.86□□□□□ -0.03
SDC1-205ENST00000447124 RPRMQ9NS64 109 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 GSKIPQ9P0R6 139 aa14.86□□□□□ -0.03
SDC1-205ENST00000447124 DEFB131BA0A096LNP1 70 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 SMIM9A6NGZ8 99 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 A8MTW9 85 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 SCGB1D2O95969 90 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 DLK1P80370 383 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 AMTNQ6UX39 209 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 PATE2Q6UY27 113 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 SHANK2-AS3Q9BTD1 123 aa14.85□□□□□ -0.03
SDC1-205ENST00000447124 RCL1Q9Y2P8 373 aaKnown RBP14.85□□□□□ -0.03
SDC1-205ENST00000447124 HYPMO75409 117 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 MBPP02686 304 aaPredicted RBP14.84□□□□□ -0.03
SDC1-205ENST00000447124 EMP1P54849 157 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 CNPY1Q3B7I2 92 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 SAMD13Q5VXD3 122 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 GPR82Q96P67 336 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 RNF126Q9BV68 326 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 NPVFQ9HCQ7 196 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 PLA2G2EQ9NZK7 142 aa14.84□□□□□ -0.03
SDC1-205ENST00000447124 LYRM1O43325 122 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 LINC00869P0C866 280 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 TAS2R30P59541 319 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 C20orf85Q9H1P6 137 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 DNAH17Q9UFH2 4485 aa14.83□□□□□ -0.04
SDC1-205ENST00000447124 C7orf66A4D0T2 115 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 CCSO14618 274 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 TSC22D2O75157 780 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 TCRBP04435 133 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 FGL1Q08830 312 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 RNF182Q8N6D2 247 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 OR10P1Q8NGE3 313 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 UHRF2Q96PU4 802 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 NDUFA13Q9P0J0 144 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 RFNGQ9Y644 331 aa14.82□□□□□ -0.04
SDC1-205ENST00000447124 FNDC10F2Z333 226 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 OR5G3P0C626 314 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 SPART-AS1P0CW21 52 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 RAP2BP61225 183 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 SELENOTP62341 195 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 SLC38A11Q08AI6 406 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 DKK2Q9UBU2 259 aa14.81□□□□□ -0.04
SDC1-205ENST00000447124 TRAV6A0A075B6T7 132 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 TMEM189A5PLL7 270 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 K7EPK0 472 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 PRM2P04554 102 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 S100A7P31151 101 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 CNN1P51911 297 aaKnown RBP14.8□□□□□ -0.04
SDC1-205ENST00000447124 SEC22CQ9BRL7 303 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 ARL6Q9H0F7 186 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 GOLT1BQ9Y3E0 138 aa14.8□□□□□ -0.04
SDC1-205ENST00000447124 MRPS12O15235 138 aaKnown RBP14.79□□□□□ -0.04
SDC1-205ENST00000447124 CRXO43186 299 aaPredicted RBP14.79□□□□□ -0.04
SDC1-205ENST00000447124 RPL7P18124 248 aaKnown RBP14.79□□□□□ -0.04
SDC1-205ENST00000447124 FAM222AQ5U5X8 452 aa14.79□□□□□ -0.04
SDC1-205ENST00000447124 TEPPQ6URK8 271 aa14.79□□□□□ -0.04
SDC1-205ENST00000447124 OR11H7Q8NGC8 314 aa14.79□□□□□ -0.04
SDC1-205ENST00000447124 IGF2BP2-AS1Q96M15 143 aa14.79□□□□□ -0.04
SDC1-205ENST00000447124 MGAT4CQ9UBM8 478 aa14.79□□□□□ -0.04
SDC1-205ENST00000447124 DNAH2Q9P225 4427 aa14.78□□□□□ -0.04
SDC1-205ENST00000447124 AMBPP02760 352 aa14.78□□□□□ -0.04
SDC1-205ENST00000447124 PRB4P10163 310 aaPredicted RBP14.78□□□□□ -0.04
SDC1-205ENST00000447124 ZNF431Q8TF32 576 aaPredicted RBP14.78□□□□□ -0.04
SDC1-205ENST00000447124 ARV1Q9H2C2 271 aa14.78□□□□□ -0.04
SDC1-205ENST00000447124 C11orf1Q9H5F2 150 aa14.78□□□□□ -0.04
SDC1-205ENST00000447124 A0A087X0K7 114 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 M0R2Z0 102 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 AGPAT2O15120 278 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 DUSP14O95147 198 aaKnown RBP14.77□□□□□ -0.05
SDC1-205ENST00000447124 HBE1P02100 147 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 CXCL3P19876 107 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 GGACTQ9BVM4 153 aa14.77□□□□□ -0.05
SDC1-205ENST00000447124 LOC102723971A0A1B0GUV8 181 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 FAM25EA8MYX2 175 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 SPINK13Q1W4C9 94 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 ZNF738Q8NE65 137 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 TMEM37Q8WXS4 190 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 MGST2Q99735 147 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 NIPSNAP3BQ9BS92 247 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 NUDT15Q9NV35 164 aa14.76□□□□□ -0.05
SDC1-205ENST00000447124 LSM5Q9Y4Y9 91 aaKnown RBP14.76□□□□□ -0.05
SDC1-205ENST00000447124 YTHDF2Q9Y5A9 579 aaKnown RBP14.76□□□□□ -0.05
SDC1-205ENST00000447124 FAM24AA6NFZ4 105 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 GOSR2O14653 212 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 SNRPCP09234 159 aaKnown RBP14.75□□□□□ -0.05
SDC1-205ENST00000447124 PSG3Q16557 428 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 RRN3P1Q2M238 152 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 C12orf45Q8N5I9 185 aaPredicted RBP14.75□□□□□ -0.05
SDC1-205ENST00000447124 NDUFAF3Q9BU61 184 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 FAT2Q9NYQ8 4349 aa14.75□□□□□ -0.05
SDC1-205ENST00000447124 HERC2O95714 4834 aa14.74□□□□□ -0.05
SDC1-205ENST00000447124 ZNF705GA8MUZ8 300 aaPredicted RBP14.74□□□□□ -0.05
SDC1-205ENST00000447124 L7N2F9 121 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms